Regulon of KdgR in Thermotoga sp. RQ2

Properties
Regulator type:	Transcription factor
TF locus tag:	TRQ2_0882
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Glucuronate utilization
Effector:	2-keto-3-deoxygluconate
Regulog:	KdgR - Thermotogales
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By trascription factor - KdgR
By TF family - IclR
By effector - 2-keto-3-deoxygluconate
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -199 Score: 6 Sequence: TGTGAAAGGAACTTTCAAA Locus tag: TRQ2_0886 Name: xtpF Funciton: Xylan oligosaccharide ABC transporter, permease component 1 Locus tag: TRQ2_0887 Name: xtpG Funciton: Xylan oligosaccharide ABC transporter, permease component 2 Locus tag: TRQ2_0888 Name: xtpK Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 1 Locus tag: TRQ2_0889 Name: xtpL Funciton: Xylan oligosaccharide ABC transporter, ATP-binding protein 2 Locus tag: TRQ2_0890 Name: xtpE Funciton: Xylan oligosaccharide ABC transporter, substrate-binding component Locus tag: TRQ2_0891 Name: aguA Funciton: Alpha-glucuronidase (EC 3.2.1.139)
	TRQ2_0886	xtpF	Xylan oligosaccharide ABC transporter, permease component 1
	TRQ2_0887	xtpG	Xylan oligosaccharide ABC transporter, permease component 2
	TRQ2_0888	xtpK	Xylan oligosaccharide ABC transporter, ATP-binding protein 1
	TRQ2_0889	xtpL	Xylan oligosaccharide ABC transporter, ATP-binding protein 2
	TRQ2_0890	xtpE	Xylan oligosaccharide ABC transporter, substrate-binding component
	TRQ2_0891	aguA	Alpha-glucuronidase (EC 3.2.1.139)
Position: -32 Score: 5.9 Sequence: TGAGAAAACCATTTTCAAA Locus tag: TRQ2_0883 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: TRQ2_0884 Name: null Funciton: hypothetical protein
	TRQ2_0883	uxaC	Uronate isomerase (EC 5.3.1.12)
	TRQ2_0884		hypothetical protein
Position: -88 Score: 5.9 Sequence: TTTGAAAATGGTTTTCTCA Locus tag: TRQ2_0882 Name: kdgR Funciton: Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family
	TRQ2_0882	kdgR	Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family
Position: -138 Score: 6 Sequence: TTTGAAAGTTCCTTTCACA Locus tag: TRQ2_0885 Name: xynA1 Funciton: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)
	TRQ2_0885	xynA1	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD