Regulon of MetR in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_1682 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -97
Score: 5.2 Sequence: CATGAATGAAATTCATG
Locus tag: Pmen_2159
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13) |
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13)
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Position: -115
Score: 4.9 Sequence: AGTGAGACAAACTCAAG
Position: -84
Score: 3.8 Sequence: CTAAAGATTTACTCATG
Locus tag: Pmen_1682
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -102
Score: 3.8 Sequence: CATGAGTAAATCTTTAG
Position: -71
Score: 4.9 Sequence: CTTGAGTTTGTCTCACT
Locus tag: Pmen_1683
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |