Profile of regulator MetR in Pseudomonadaceae
Properties
| Regulator family: |
LysR |
| Regulation mode: |
repressor (activator) |
| Biological process: |
Methionine biosynthesis |
| Effector: |
Homocysteine |
| Regulog: |
MetR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA1843 |
metH |
-258 |
5 |
AATGAGCCAGACTCATT |
|
PA1843 |
metH |
-95 |
5 |
CTTGAATGAAATTCATG |
|
PA1927 |
metE |
-69 |
5.3 |
ATTGAGTTTGTCTCATG |
|
PA3587 |
metR |
-59 |
4.9 |
TATGAGACAAACTCAAC |
|
Pseudomonas entomophila L48
|
|
PSEEN4641 |
metF2 |
-104 |
3.8 |
AACGAAAATGTCTCAAC |
|
PSEEN4641 |
metF2 |
-236 |
4.6 |
GGTGAGACAAACTCATA |
|
PSEEN4641 |
metF2 |
-216 |
4.8 |
TTTGAGATGAACTCAAG |
|
PSEEN2746 |
PF08908 |
-215 |
4.5 |
CATGAGTAAAACTAAAT |
|
PSEEN2746 |
PF08908 |
-184 |
5.4 |
AATGAGTTTGTCTCATT |
|
PSEEN4639 |
metE |
-72 |
4.6 |
TATGAGTTTGTCTCACC |
|
PSEEN4639 |
metE |
-92 |
4.8 |
CTTGAGTTCATCTCAAA |
|
PSEEN1184 |
metR |
-57 |
4.8 |
CATGAGGGAAACTCAAC |
|
PSEEN1184 |
metR |
17 |
3.8 |
CCTGAAAACCCTTCATG |
|
PSEEN3382 |
metH |
-98 |
4.8 |
CATGAAGGAAATTCATG |
|
PSEEN4253 |
dsbC |
-158 |
4.7 |
GATGAATGATATTCATG |
|
Pseudomonas putida KT2440
|
|
PP4638 |
metF2 |
-172 |
5.2 |
ATTGAGACAAACTCATT |
|
PP4637 |
metE2 |
-72 |
5.2 |
AATGAGTTTGTCTCAAT |
|
PP4638 |
metF2 |
-152 |
4 |
TTTGAGATGAACCCAAG |
|
PP4637 |
metE2 |
-92 |
4 |
CTTGGGTTCATCTCAAA |
|
PP1469 |
dsbC |
-119 |
4.7 |
GATGAATGTTTTTCATG |
|
PP1063 |
metR |
17 |
3.8 |
CCTGAAAACCCTTCATG |
|
PP2699 |
PF08908 |
-66 |
4.1 |
CTTCAATATCATTCATG |
|
PP2699 |
PF08908 |
-76 |
3.9 |
TGTGAAATAACTTCAAT |
|
PP1063 |
metR |
-57 |
5.3 |
CATGAGAGAAACTCAAT |
|
PP2375 |
metH |
-98 |
4.4 |
CATGAGCAGTTTTCATG |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO4179 |
metE |
-64 |
5.5 |
AATGAGTTTGTCTCATG |
|
PSPTO4180 |
metR |
-59 |
5.5 |
CATGAGACAAACTCATT |
|
PSPTO2732 |
metH |
-99 |
4.9 |
CATGAATGATTTTCATG |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_3662 |
metH |
-96 |
4.9 |
CATGAGCGATATTCATG |
|
PFL_3510 |
PF08908 |
-190 |
4.4 |
CATGAATGTGACTAAAG |
|
PFL_3510 |
PF08908 |
-169 |
4.1 |
GGTGAAATCAATTCATT |
|
PFL_2404 |
metE |
-69 |
4.8 |
AATGAGTTTGTCTCACC |
|
PFL_4890 |
metR |
-26 |
3.8 |
CACAAAATTTACTCATG |
|
PFL_4890 |
metR |
-57 |
5.2 |
CATGAGACAAACTCAAC |
|
Pseudomonas mendocina ymp
|
|
Pmen_2159 |
metH |
-97 |
5.2 |
CATGAATGAAATTCATG |
|
Pmen_1683 |
metE |
-71 |
4.9 |
CTTGAGTTTGTCTCACT |
|
Pmen_1683 |
metE |
-102 |
3.8 |
CATGAGTAAATCTTTAG |
|
Pmen_1682 |
metR |
-115 |
4.9 |
AGTGAGACAAACTCAAG |
|
Pmen_1682 |
metR |
-84 |
3.8 |
CTAAAGATTTACTCATG |
|
Pseudomonas stutzeri A1501
|
|
PST_2223 |
metH |
-96 |
4.2 |
CCTGAATAATCTTCATG |
|
PST_2850 |
metE |
-73 |
4.8 |
CGTGAGTTTGTTTCATT |
|
PST_2852 |
metR |
-89 |
4.4 |
GATGAGCCTCGCTCATC |
|
Azotobacter vinelandii AvOP
|
|
Avin_13980 |
metE |
-66 |
4.9 |
TCTGAGTTTGTCTCATG |
|
Avin_13970 |
metR |
-58 |
4.9 |
CATGAGACAAACTCAGA |
Export
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Regulatory Sites
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