Regulon of MetR in Pseudomonas fluorescens Pf-5

Properties
Regulator type:	Transcription factor
TF locus tag:	PFL_4890
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -190 Score: 4.4 Sequence: CATGAATGTGACTAAAG Position: -169 Score: 4.1 Sequence: GGTGAAATCAATTCATT Locus tag: PFL_3510 Name: PF08908 Funciton: Protein of unknown function DUF1852 Locus tag: PFL_3511 Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) Locus tag: PFL_3512 Name: PF01613 Funciton: Flavin reductase-like, FMN-binding
	PFL_3510	PF08908	Protein of unknown function DUF1852
	PFL_3511	metE2	Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
	PFL_3512	PF01613	Flavin reductase-like, FMN-binding
Position: -96 Score: 4.9 Sequence: CATGAGCGATATTCATG Locus tag: PFL_3662 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13)
	PFL_3662	metH	5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13)
Position: -57 Score: 5.2 Sequence: CATGAGACAAACTCAAC Position: -26 Score: 3.8 Sequence: CACAAAATTTACTCATG Locus tag: PFL_4890 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	PFL_4890	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -69 Score: 4.8 Sequence: AATGAGTTTGTCTCACC Locus tag: PFL_2404 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	PFL_2404	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD