Regulon of MetR in Pseudomonas entomophila L48
| Regulator type: | Transcription factor |
| TF locus tag: | PSEEN1184 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -236
Score: 4.6 Sequence: GGTGAGACAAACTCATA
Position: -216
Score: 4.8 Sequence: TTTGAGATGAACTCAAG
Position: -104
Score: 3.8 Sequence: AACGAAAATGTCTCAAC
Locus tag: PSEEN4641
Name: metF2 Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metF2
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -215
Score: 4.5 Sequence: CATGAGTAAAACTAAAT
Position: -184
Score: 5.4 Sequence: AATGAGTTTGTCTCATT
Locus tag: PSEEN2746
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: PSEEN2747
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: PSEEN2748
Name: PF01613 Funciton: Flavin reductase-like, FMN-binding |
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PF08908
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Protein of unknown function DUF1852
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metE2
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Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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PF01613
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Flavin reductase-like, FMN-binding
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Position: -158
Score: 4.7 Sequence: GATGAATGATATTCATG
Locus tag: PSEEN4253
Name: dsbC Funciton: Thiol:disulfide interchange protein DsbC
Locus tag: PSEEN4252
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: PSEEN4251
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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dsbC
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Thiol:disulfide interchange protein DsbC
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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thrC
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Threonine synthase (EC 4.2.3.1)
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Position: -98
Score: 4.8 Sequence: CATGAAGGAAATTCATG
Locus tag: PSEEN3382
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13) |
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase, B12-dependent (EC 2.1.1.13)
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Position: -92
Score: 4.8 Sequence: CTTGAGTTCATCTCAAA
Position: -72
Score: 4.6 Sequence: TATGAGTTTGTCTCACC
Locus tag: PSEEN4639
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -57
Score: 4.8 Sequence: CATGAGGGAAACTCAAC
Position: 17
Score: 3.8 Sequence: CCTGAAAACCCTTCATG
Locus tag: PSEEN1184
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |