Regulon of MetR in Marinomonas sp. MWYL1
| Regulator type: | Transcription factor |
| TF locus tag: | Mmwyl1_3390 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -95
Score: 4.8 Sequence: ATGATCTTTTTTCAT
Locus tag: Mmwyl1_2283
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: Mmwyl1_2284
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Mmwyl1_2285
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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gcvH
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Glycine cleavage system H protein
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gcvP
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
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Position: -169
Score: 5.4 Sequence: ATGAATAATATTCAT
Position: -149
Score: 4 Sequence: TTAAAATAAATTCAT
Locus tag: Mmwyl1_0387
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: Mmwyl1_0388
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
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PF08908
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Protein of unknown function DUF1852
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metE2
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Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |