Regulon of MetR in Oceanospirillum sp. MED92
| Regulator type: | Transcription factor |
| TF locus tag: | MED92_02289 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -188
Score: 4.4 Sequence: ATGAATAAATATAAT
Position: -167
Score: 4.7 Sequence: ATGAAAAGGTATCAT
Locus tag: MED92_05643
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: MED92_05638
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
|||
|
PF08908
|
Protein of unknown function DUF1852
|
||
|
metE2
|
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
|
||
|
Position: -129
Score: 4.3 Sequence: ATGACCAATTTTCAT
Locus tag: MED92_04362
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
|||
|
metH
|
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |