Regulon of SoxR in Vibrio vulnificus CMCP6
| Regulator type: | Transcription factor |
| TF locus tag: | VV20936 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Regulog: | SoxR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - SoxR
- By TF family - MerR
- By effector - Paraquat
- By pathway - Superoxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -80
Score: 6.6 Sequence: AGCTCAACTTAACTTGAGGT
Locus tag: VV20936
Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family |
|||
|
soxR
|
Redox-sensitive transcriptional activator, MerR family
|
||
|
Position: -68
Score: 6.6 Sequence: ACCTCAAGTTAAGTTGAGCT
Locus tag: VV20937
Name: PF07690 Funciton: Permease of the major facilitator superfamily |
|||
|
PF07690
|
Permease of the major facilitator superfamily
|
||
|
Position: -58
Score: 6.8 Sequence: ACCTCAATTTAACTTGAGGT
Locus tag: VV20607
Name: PF00903 Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase
Locus tag: VV20606
Name: PF00903 Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase |
|||
|
PF00903
|
Glyoxalase/bleomycin resistance protein/dioxygenase
|
||
|
PF00903
|
Glyoxalase/bleomycin resistance protein/dioxygenase
|
||
|
Position: -80
Score: 6.7 Sequence: ACCTCAAGTTAACTTGAGGA
Locus tag: VV21129
Name: wrbA Funciton: Multimeric flavodoxin |
|||
|
wrbA
|
Multimeric flavodoxin
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |