Profile of regulator SoxR in Vibrionales
Properties
| Regulator family: |
MerR |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Superoxide stress response |
| Effector: |
Paraquat |
| Regulog: |
SoxR - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VCA0085 |
PF07690 |
-60 |
6.9 |
ACCTAAAGTTAACTTGAGGT |
|
VCA0084 |
soxR |
-138 |
6.9 |
ACCTCAAGTTAACTTTAGGT |
|
Vibrio vulnificus CMCP6
|
|
VV20936 |
soxR |
-80 |
6.6 |
AGCTCAACTTAACTTGAGGT |
|
VV20937 |
PF07690 |
-68 |
6.6 |
ACCTCAAGTTAAGTTGAGCT |
|
VV20607 |
PF00903 |
-58 |
6.8 |
ACCTCAATTTAACTTGAGGT |
|
VV21129 |
wrbA |
-80 |
6.7 |
ACCTCAAGTTAACTTGAGGA |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_06555 |
soxR |
-48 |
6.3 |
ACCTCAAGTGAACTTGAGGA |
|
VIBHAR_07059 |
wrbA |
-152 |
6.5 |
ACCTCAACCTAGCTTGAGGT |
|
VIBHAR_04755 |
PF00903 |
-67 |
6.6 |
ACCTTAACTTAACTTGAGGT |
|
VIBHAR_06924 |
nhoA |
-64 |
6.2 |
ACCTCAACTTCGGTTGAGGT |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VPA0335 |
soxR |
-60 |
6.8 |
ACCTCAAGTAAACTTGAGGT |
|
VPA0333 |
PF07690 |
-160 |
6.8 |
ACCTCAAGTTTACTTGAGGT |
|
VPA0391 |
PF00903 |
-69 |
6.5 |
ACCTAAACTTAGCTTGAGGT |
|
VPA1738 |
wrbA |
-70 |
6.2 |
ACCTAAACCAAACTTGAGGT |
|
VPA1685 |
PF00903 |
-67 |
6.4 |
ACCTCGATTTAACTTGAGGT |
|
Vibrio shilonii AK1
|
|
VSAK1_19649 |
soxR |
-52 |
6.1 |
ACCTCAACATTACTTGAGGT |
|
VSAK1_19654 |
PF07690 |
-59 |
6.1 |
ACCTCAAGTAATGTTGAGGT |
|
VSAK1_17857 |
PF00903 |
-60 |
6.7 |
ACCTCAAGTTAACTTGAGGA |
|
Vibrio splendidus LGP32
|
|
VS_II1117 |
PF00903 |
-28 |
7 |
ACCTCAACTTAACTTGAGGT |
|
Vibrio angustum S14
|
|
VAS14_15449 |
PF00903 |
-60 |
5.9 |
ACCTCAAGTTTACTCGAGGA |
|
VAS14_10824 |
wrbA |
-63 |
6.7 |
ACCTCAGGTTAACTTGAGGT |
|
VAS14_11599 |
nhoA |
-89 |
6.4 |
ACCTCAACTTAACTTGAGGG |
|
Photobacterium profundum SS9
|
|
PBPRB1506 |
PF07690 |
-62 |
6.2 |
ACCTCAAGTTAACCTGAGGC |
|
PBPRB1505 |
soxR |
-46 |
6.2 |
GCCTCAGGTTAACTTGAGGT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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