Regulon of LiuR in Phenylobacterium zucineum HLK1
| Regulator type: | Transcription factor |
| TF locus tag: | PHZ_c2019, PHZ_c3353 |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Caulobacterales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Caulobacterales
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -94
Score: 5.1 Sequence: GTTTACGTTGACGTTAGC
Position: -88
Score: 5.6 Sequence: GTTGACGTTAGCGTCATC
Locus tag: PHZ_c2336
Name: acdL2 Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
Locus tag: PHZ_c2335
Name: acdH2 Funciton: Acyl-CoA dehydrogenase family protein |
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acdL2
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Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
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acdH2
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Acyl-CoA dehydrogenase family protein
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Position: -64
Score: 4.9 Sequence: CTTGACGTAAACGGAAAG
Locus tag: PHZ_c3353
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: PHZ_c3354
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: PHZ_c3355
Name: null Funciton: predicted redox protein, regulator of disulfide bond formation |
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liuR
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Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
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acdH
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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predicted redox protein, regulator of disulfide bond formation
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |