Regulon of LiuR in Sphingobium japonicum UT26S

Properties
Regulator type:	Transcription factor
TF locus tag:	SJA_C1-09700
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Sphingomonadales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 65 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Sphingomonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -66 Score: 5.9 Sequence: CTTTACGTAAACGTAAAT Locus tag: SJA_C1-20790 Name: fadA Funciton: acetyl-CoA acyltransferase Locus tag: SJA_C1-20800 Name: fadB Funciton: 3-hydroxyacyl-CoA dehydrogenase
	SJA_C1-20790	fadA	acetyl-CoA acyltransferase
	SJA_C1-20800	fadB	3-hydroxyacyl-CoA dehydrogenase
Position: -56 Score: 5.8 Sequence: GTTGACGTTTTCGTAAAC Position: -50 Score: 5.3 Sequence: GTTTTCGTAAACGGAAAC Locus tag: SJA_C1-17900 Name: null Funciton: Acyl dehydratase
	SJA_C1-17900		Acyl dehydratase
Position: -37 Score: 6.1 Sequence: CTTGACGTAAACGTAAAG Locus tag: SJA_C1-09700 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: SJA_C1-09690 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	SJA_C1-09700	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	SJA_C1-09690	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -44 Score: 5.3 Sequence: CTTTACGCTTGCGTAAAG Position: -38 Score: 4.5 Sequence: GCTTGCGTAAAGGGAAAG Locus tag: SJA_C1-12520 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	SJA_C1-12520	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD