Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Sphingobium japonicum UT26S

Properties
Regulator type: Transcription factor
TF locus tag: SJA_C1-09700
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Sphingomonadales
Statistics of regulated genes:
- Genes 6
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 65 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -66
Score: 5.9
Sequence: CTTTACGTAAACGTAAAT
Locus tag: SJA_C1-20790
Name: fadA
Funciton: acetyl-CoA acyltransferase
Locus tag: SJA_C1-20800
Name: fadB
Funciton: 3-hydroxyacyl-CoA dehydrogenase
fadA
acetyl-CoA acyltransferase
fadB
3-hydroxyacyl-CoA dehydrogenase

Position: -56
Score: 5.8
Sequence: GTTGACGTTTTCGTAAAC
Position: -50
Score: 5.3
Sequence: GTTTTCGTAAACGGAAAC
Locus tag: SJA_C1-17900
Name: null
Funciton: Acyl dehydratase
Acyl dehydratase

Position: -37
Score: 6.1
Sequence: CTTGACGTAAACGTAAAG
Locus tag: SJA_C1-09700
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: SJA_C1-09690
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)

Position: -44
Score: 5.3
Sequence: CTTTACGCTTGCGTAAAG
Position: -38
Score: 4.5
Sequence: GCTTGCGTAAAGGGAAAG
Locus tag: SJA_C1-12520
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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