Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Erythrobacter sp. NAP1

Properties
Regulator type: Transcription factor
TF locus tag: NAP1_05180
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Sphingomonadales
Statistics of regulated genes:
- Genes 19
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 65 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 5.5
Sequence: CTTTACGGATACGTCAAC
Locus tag: NAP1_15383
Name: acdB
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: NAP1_15388
Name: null
Funciton: Acetyl-CoA acetyltransferase
NAP1_15383
acdB
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
NAP1_15388
Acetyl-CoA acetyltransferase
Position: -104
Score: 6
Sequence: CTTGACGTTTACGTAAAC
Position: -98
Score: 5.7
Sequence: GTTTACGTAAACGCAAGC
Locus tag: NAP1_12578
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NAP1_12583
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
NAP1_12578
etfB
Electron transfer flavoprotein, beta subunit
NAP1_12583
etfA
Electron transfer flavoprotein, alpha subunit
Position: -61
Score: 4.5
Sequence: AATGACGATAACGTAAGC
Position: -55
Score: 5
Sequence: GATAACGTAAGCGTCAAC
Locus tag: NAP1_10032
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: NAP1_10027
Name: null
Funciton: GTPases - Sulfate adenylate transferase subunit 1
Locus tag: NAP1_10022
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: NAP1_10017
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
NAP1_10032
acdQ
Acyl-CoA dehydrogenases
NAP1_10027
GTPases - Sulfate adenylate transferase subunit 1
NAP1_10022
acdP
Acyl-CoA dehydrogenase family protein
NAP1_10017
short-chain dehydrogenase/reductase SDR
Position: -37
Score: 5.6
Sequence: CTTGACGTTTGCGTAAGC
Locus tag: NAP1_01850
Name: null
Funciton: Acyl-CoA thioesterase II (EC 3.1.2.-)
NAP1_01850
Acyl-CoA thioesterase II (EC 3.1.2.-)
Position: -70
Score: 5.4
Sequence: GTTTACGCGAGCGTAAAG
Locus tag: NAP1_08185
Name: null
Funciton: Possible 3-oxo-(Acyl) acyl carrier protein reductase
NAP1_08185
Possible 3-oxo-(Acyl) acyl carrier protein reductase
Position: -32
Score: 5.3
Sequence: GTTTACGTAAACGGGAAG
Locus tag: NAP1_00605
Name: acdA3
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: NAP1_00610
Name: null
Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
NAP1_00605
acdA3
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
NAP1_00610
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
Position: -60
Score: 4.9
Sequence: GTTGACGGACACGTCACC
Locus tag: NAP1_09247
Name: fpr
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Locus tag: NAP1_09242
Name: null
Funciton: hypothetical protein
Locus tag: NAP1_09237
Name: acdH3
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
NAP1_09247
fpr
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
NAP1_09242
hypothetical protein
NAP1_09237
acdH3
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -90
Score: 5.6
Sequence: GTTGACGTATCCGTAAAG
Locus tag: NAP1_15378
Name: acdA
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: NAP1_15373
Name: null
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
NAP1_15378
acdA
Enoyl-CoA hydratase (EC 4.2.1.17)
NAP1_15373
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Position: -36
Score: 5.8
Sequence: CTTGACGTTCACGTAAAG
Position: -30
Score: 5.4
Sequence: GTTCACGTAAAGGTAAAG
Locus tag: NAP1_05180
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: NAP1_05185
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
NAP1_05180
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
NAP1_05185
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
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