Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Erythrobacter litoralis HTCC2594

Properties
Regulator type: Transcription factor
TF locus tag: ELI_05890
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Sphingomonadales
Statistics of regulated genes:
- Genes 15
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 65 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -60
Score: 5.5
Sequence: CTTTACGAAAACGTCAAC
Locus tag: ELI_00045
Name: acdB
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
ELI_00045
acdB
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -78
Score: 6
Sequence: CTTGACGTTTACGTAAAC
Position: -72
Score: 5.7
Sequence: GTTTACGTAAACGCAAGC
Locus tag: ELI_13505
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: ELI_13500
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
ELI_13505
etfB
Electron transfer flavoprotein, beta subunit
ELI_13500
etfA
Electron transfer flavoprotein, alpha subunit
Position: -71
Score: 5.1
Sequence: GTTGACGGGCGCGTAAAG
Locus tag: ELI_08825
Name: null
Funciton: Possible 3-oxo-(Acyl) acyl carrier protein reductase
ELI_08825
Possible 3-oxo-(Acyl) acyl carrier protein reductase
Position: -58
Score: 5.6
Sequence: GTTGACGCAAACGTAAGG
Locus tag: ELI_01475
Name: acdA3
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: ELI_01480
Name: null
Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
Locus tag: ELI_01485
Name: acdB4
Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
ELI_01475
acdA3
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
ELI_01480
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
ELI_01485
acdB4
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Position: -73
Score: 5.7
Sequence: GTTGACGTTTTCGTAAAG
Locus tag: ELI_00050
Name: acdA
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: ELI_00055
Name: null
Funciton: Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
Locus tag: ELI_00060
Name: acdH3
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ELI_00050
acdA
Enoyl-CoA hydratase (EC 4.2.1.17)
ELI_00055
Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
ELI_00060
acdH3
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -37
Score: 5.3
Sequence: CTTGACCTTTACGTAAAG
Position: -31
Score: 4.7
Sequence: CTTTACGTAAAGGGCATG
Locus tag: ELI_05890
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: ELI_05895
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
ELI_05890
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
ELI_05895
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -44
Score: 5.1
Sequence: CCTAACGTTAGCGTCAAG
Locus tag: ELI_09605
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: ELI_09600
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: ELI_09595
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
ELI_09605
acdQ
Acyl-CoA dehydrogenases
ELI_09600
acdP
Acyl-CoA dehydrogenase family protein
ELI_09595
short-chain dehydrogenase/reductase SDR
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