Regulon of LiuR in Hyphomonas neptunium ATCC 15444

Properties
Regulator type:	Transcription factor
TF locus tag:	HNE_0667
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Rhodobacterales
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Rhodobacterales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -95 Score: 5.4 Sequence: GTTTACGTGCGCGTCACC Locus tag: HNE_2094 Name: acdL2 Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13) Locus tag: HNE_2093 Name: acdH2 Funciton: Pimeloyl-CoA dehydrogenase (Small subunit) (EC 1.3.1.62)
	HNE_2094	acdL2	Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
	HNE_2093	acdH2	Pimeloyl-CoA dehydrogenase (Small subunit) (EC 1.3.1.62)
Position: -56 Score: 5.8 Sequence: GCTTACGTGAACGTAAGC Position: -50 Score: 4.6 Sequence: GTGAACGTAAGCGGCAAC Locus tag: HNE_0669 Name: acdL Funciton: acyl-CoA dehydrogenase Locus tag: HNE_0670 Name: null Funciton: hypothetical protein Locus tag: HNE_0671 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: HNE_0672 Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	HNE_0669	acdL	acyl-CoA dehydrogenase
	HNE_0670		hypothetical protein
	HNE_0671	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	HNE_0672	acdB	Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Position: -83 Score: 5.1 Sequence: GTTGACGTGCGCGGAAAG Locus tag: HNE_0667 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: HNE_0668 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	HNE_0667	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	HNE_0668	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -88 Score: 5.4 Sequence: GTTTACGTCAACGGAAGG Locus tag: HNE_2706 Name: acdA2 Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	HNE_2706	acdA2	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -64 Score: 5.2 Sequence: GTTGACGTGAACGTCTGG Locus tag: HNE_2820 Name: null Funciton: oxidoreductase, short chain dehydrogenase/reductase family
	HNE_2820		oxidoreductase, short chain dehydrogenase/reductase family
Position: -98 Score: 5 Sequence: CCTCACGTAAGCGTCAAG Locus tag: HNE_3471 Name: eftB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: HNE_3470 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	HNE_3471	eftB	Electron transfer flavoprotein, beta subunit
	HNE_3470	etfA	Electron transfer flavoprotein, alpha subunit

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