Profile of regulator LiuR in Rhodobacterales
Properties
| Regulator family: |
MerR |
| Regulation mode: |
repressor |
| Biological process: |
Branched-chain amino acid degradation |
| Effector: |
|
| Regulog: |
LiuR - Rhodobacterales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Rhodobacter sphaeroides 2.4.1
|
|
RSP_2200 |
liuR |
-87 |
6.3 |
GTTTACGTCAACGTCAAG |
|
Paracoccus denitrificans PD1222
|
|
Pden_2867 |
liuR |
5 |
5.3 |
CCTTACGCGAACGTCAAC |
|
Jannaschia sp. CCS1
|
|
Jann_2969 |
liuR |
-93 |
5.2 |
AATTACGTAAACGTCATC |
|
Rhodobacterales bacterium HTCC2654
|
|
RB2654_20563 |
liuR |
-69 |
5.7 |
GTTGACGTAAACGTAATC |
|
Loktanella vestfoldensis SKA53
|
|
SKA53_09319 |
liuR |
-84 |
6 |
GTTTACGTAAACGTCACC |
|
Oceanicola batsensis HTCC2597
|
|
OB2597_06240 |
liuR |
-84 |
5.3 |
GCTTACGCTTGCGTCAAC |
|
Roseovarius nubinhibens ISM
|
|
ISM_02035 |
liuR |
-79 |
5.8 |
ACTTACGTAAACGTCAAT |
|
Roseovarius sp. 217
|
|
ROS217_11336 |
liuR |
-117 |
4.6 |
TCTTACGTCAACTTCAAA |
|
Silicibacter TM1040
|
|
TM1040_1556 |
liuR |
-98 |
5.5 |
AGTTACGTAAACGTCAAG |
|
Silicibacter pomeroyi DSS-3
|
|
SPO2914 |
liuR |
-87 |
6.3 |
GCTTACGTCAACGTCAAG |
|
Roseobacter sp. MED193
|
|
MED193_05934 |
liuR |
-105 |
6.4 |
GCTTACGTAAACGTCAAG |
|
Hyphomonas neptunium ATCC 15444
|
|
HNE_0667 |
liuR |
-83 |
5.1 |
GTTGACGTGCGCGGAAAG |
|
HNE_0669 |
acdL |
-56 |
5.8 |
GCTTACGTGAACGTAAGC |
|
HNE_0669 |
acdL |
-50 |
4.6 |
GTGAACGTAAGCGGCAAC |
|
HNE_2094 |
acdL2 |
-95 |
5.4 |
GTTTACGTGCGCGTCACC |
|
HNE_2706 |
acdA2 |
-88 |
5.4 |
GTTTACGTCAACGGAAGG |
|
HNE_2820 |
null |
-64 |
5.2 |
GTTGACGTGAACGTCTGG |
|
HNE_3471 |
eftB |
-98 |
5 |
CCTCACGTAAGCGTCAAG |
|
Oceanicaulis alexandrii HTCC2633
|
|
OA2633_06094 |
liuR |
-36 |
5.9 |
GTTGACGTTCACGTCAAG |
Export
|
Regulatory Sites
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