Regulon of LiuR in Silicibacter pomeroyi DSS-3
| Regulator type: | Transcription factor |
| TF locus tag: | SPO2914 |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Rhodobacterales
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -87
Score: 6.3 Sequence: GCTTACGTCAACGTCAAG
Locus tag: SPO2914
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: SPO2915
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: SPO2916
Name: null Funciton: hypothetical protein
Locus tag: SPO2917
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: SPO2918
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: SPO2919
Name: null Funciton: hypothetical protein
Locus tag: SPO2920
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
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liuR
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Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
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acdH
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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hypothetical protein
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PF04828
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Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
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acdA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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hypothetical protein
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acdB
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Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |