Regulon of LiuR in Pseudomonas stutzeri A1501
| Regulator type: | Transcription factor |
| TF locus tag: | PST_3221 |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Pseudomonadaceae
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -99
Score: 4.6 Sequence: CTTGCCGTATACGGAAAC
Position: -76
Score: 5.2 Sequence: GTTATCGTTTACGTAAAG
Position: -70
Score: 5.4 Sequence: GTTTACGTAAAGGTCATG
Locus tag: PST_3208
Name: livG Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein LivG
Locus tag: PST_3207
Name: livF Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein LivF
Locus tag: PST_3206
Name: livK Funciton: Branched-chain amino acid ABC transporter, periplasmic component LivK
Locus tag: PST_3205
Name: livH Funciton: Branched-chain amino acid ABC transporter, permease protein LivH
Locus tag: PST_3204
Name: livM Funciton: Branched-chain amino acid ABC transporter, permease protein LivM |
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livG
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Branched-chain amino acid ABC transporter, ATP-binding protein LivG
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livF
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Branched-chain amino acid ABC transporter, ATP-binding protein LivF
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livK
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Branched-chain amino acid ABC transporter, periplasmic component LivK
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livH
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Branched-chain amino acid ABC transporter, permease protein LivH
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livM
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Branched-chain amino acid ABC transporter, permease protein LivM
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Position: -104
Score: 4.6 Sequence: AGTTACCTTTACGTTAAC
Position: -98
Score: 6.2 Sequence: CTTTACGTTAACGTAATC
Locus tag: PST_3211
Name: aacS Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
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aacS
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Acetoacetyl-CoA synthetase (EC 6.2.1.16)
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Position: -133
Score: 6.5 Sequence: CTTTACGTTAACGTAAAG
Locus tag: PST_3213
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PST_3214
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PST_3215
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PST_3216
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: PST_3217
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
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liuA
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Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
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liuB
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Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
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liuC
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Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
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liuD
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Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
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liuE
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Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |