Regulon of LiuR in Pseudomonas stutzeri A1501

Properties
Regulator type:	Transcription factor
TF locus tag:	PST_3221
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	11
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Pseudomonadaceae
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -99 Score: 4.6 Sequence: CTTGCCGTATACGGAAAC Position: -76 Score: 5.2 Sequence: GTTATCGTTTACGTAAAG Position: -70 Score: 5.4 Sequence: GTTTACGTAAAGGTCATG Locus tag: PST_3208 Name: livG Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein LivG Locus tag: PST_3207 Name: livF Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein LivF Locus tag: PST_3206 Name: livK Funciton: Branched-chain amino acid ABC transporter, periplasmic component LivK Locus tag: PST_3205 Name: livH Funciton: Branched-chain amino acid ABC transporter, permease protein LivH Locus tag: PST_3204 Name: livM Funciton: Branched-chain amino acid ABC transporter, permease protein LivM
	PST_3208	livG	Branched-chain amino acid ABC transporter, ATP-binding protein LivG
	PST_3207	livF	Branched-chain amino acid ABC transporter, ATP-binding protein LivF
	PST_3206	livK	Branched-chain amino acid ABC transporter, periplasmic component LivK
	PST_3205	livH	Branched-chain amino acid ABC transporter, permease protein LivH
	PST_3204	livM	Branched-chain amino acid ABC transporter, permease protein LivM
Position: -104 Score: 4.6 Sequence: AGTTACCTTTACGTTAAC Position: -98 Score: 6.2 Sequence: CTTTACGTTAACGTAATC Locus tag: PST_3211 Name: aacS Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
	PST_3211	aacS	Acetoacetyl-CoA synthetase (EC 6.2.1.16)
Position: -133 Score: 6.5 Sequence: CTTTACGTTAACGTAAAG Locus tag: PST_3213 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: PST_3214 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: PST_3215 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: PST_3216 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: PST_3217 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	PST_3213	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	PST_3214	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	PST_3215	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	PST_3216	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	PST_3217	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD