Profile of regulator LiuR in Pseudomonadaceae
Properties
| Regulator family: |
MerR |
| Regulation mode: |
repressor |
| Biological process: |
Branched-chain amino acid degradation |
| Effector: |
|
| Regulog: |
LiuR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA2557 |
aacS |
-127 |
6.5 |
CTTTACGTTAACGTAAAC |
|
PA2557 |
aacS |
-133 |
5.5 |
GTTTACCTTTACGTTAAC |
|
PA2016 |
liuR |
-34 |
5.5 |
GTTAACGTAAAGGTAAAC |
|
PA2016 |
liuR |
-40 |
6.5 |
CTTTACGTTAACGTAAAG |
|
Pseudomonas entomophila L48
|
|
PSEEN3384 |
aacS |
-81 |
5.9 |
CTTTACGTAAACGTAAAT |
|
PSEEN3384 |
aacS |
-131 |
6.2 |
GTTGACGTTAACGTAAAC |
|
PSEEN2982 |
liuR |
-59 |
5.9 |
CTTGACGTATACGTAAAC |
|
PSEEN3386 |
liuA |
-173 |
6.2 |
GTTTACGTTAACGTCAAC |
|
PSEEN3386 |
liuA |
-217 |
5.1 |
GTTTACGTAAAGGTTATG |
|
PSEEN3386 |
liuA |
-223 |
5.9 |
ATTTACGTTTACGTAAAG |
|
Pseudomonas putida KT2440
|
|
PP4063 |
aacS |
-80 |
5.9 |
CTTTACGTAAACGTAAAT |
|
PP4063 |
aacS |
-131 |
6.5 |
CTTTACGTTAACGTAAAC |
|
PP3539 |
liuR |
-59 |
5.5 |
CTTGACGTATACGTCAAC |
|
PP4064 |
liuA |
-97 |
6.5 |
GTTTACGTTAACGTAAAG |
|
PP4064 |
liuA |
-148 |
5.9 |
ATTTACGTTTACGTAAAG |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO2739 |
liuA |
109 |
6.5 |
gTTTACGTTAACGTAAAG |
|
PSPTO2743 |
liuR |
-62 |
5.7 |
CTTGACGCTTACGTAAAG |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_3935 |
aacS |
-115 |
6 |
CTTTACGTAAACGTCAAC |
|
PFL_3935 |
aacS |
-158 |
6.5 |
CTTTACGTTAACGTAAAC |
|
PFL_3933 |
liuR |
-59 |
5.5 |
CTTGACGTATACGTCAAC |
|
PFL_3936 |
liuA |
-88 |
6.5 |
GTTTACGTTAACGTAAAG |
|
PFL_3936 |
liuA |
-131 |
6 |
GTTGACGTTTACGTAAAG |
|
Pseudomonas mendocina ymp
|
|
Pmen_2034 |
liuR |
-23 |
5.5 |
GTTAACGTAAAGGTAAAC |
|
Pmen_2034 |
liuR |
-29 |
6.5 |
GTTTACGTTAACGTAAAG |
|
Pseudomonas stutzeri A1501
|
|
PST_3208 |
livG |
-70 |
5.4 |
GTTTACGTAAAGGTCATG |
|
PST_3208 |
livG |
-76 |
5.2 |
GTTATCGTTTACGTAAAG |
|
PST_3208 |
livG |
-99 |
4.6 |
CTTGCCGTATACGGAAAC |
|
PST_3211 |
aacS |
-98 |
6.2 |
CTTTACGTTAACGTAATC |
|
PST_3211 |
aacS |
-104 |
4.6 |
AGTTACCTTTACGTTAAC |
|
PST_3213 |
liuA |
-133 |
6.5 |
CTTTACGTTAACGTAAAG |
|
Azotobacter vinelandii AvOP
|
|
Avin_49570 |
liuR |
-32 |
5.4 |
GTTTACGTAAAGGTAATA |
|
Avin_49570 |
liuR |
-38 |
6.3 |
GTTTACGTTTACGTAAAG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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