Regulon of LiuR in Pseudomonas fluorescens Pf-5

Properties
Regulator type:	Transcription factor
TF locus tag:	PFL_3933
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Pseudomonadaceae
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -158 Score: 6.5 Sequence: CTTTACGTTAACGTAAAC Position: -115 Score: 6 Sequence: CTTTACGTAAACGTCAAC Locus tag: PFL_3935 Name: aacS Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
	PFL_3935	aacS	Acetoacetyl-CoA synthetase (EC 6.2.1.16)
Position: -131 Score: 6 Sequence: GTTGACGTTTACGTAAAG Position: -88 Score: 6.5 Sequence: GTTTACGTTAACGTAAAG Locus tag: PFL_3936 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: PFL_3937 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: PFL_3938 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: PFL_3939 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	PFL_3936	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	PFL_3937	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	PFL_3938	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	PFL_3939	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Position: -59 Score: 5.5 Sequence: CTTGACGTATACGTCAAC Locus tag: PFL_3933 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: PFL_3934 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	PFL_3933	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	PFL_3934	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD