Regulon of LiuR in Pseudomonas putida KT2440

Properties
Regulator type:	Transcription factor
TF locus tag:	PP3539
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Pseudomonadaceae
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -148 Score: 5.9 Sequence: ATTTACGTTTACGTAAAG Position: -97 Score: 6.5 Sequence: GTTTACGTTAACGTAAAG Locus tag: PP4064 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: PP4065 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: PP4066 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: PP4067 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	PP4064	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	PP4065	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	PP4066	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	PP4067	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Position: -59 Score: 5.5 Sequence: CTTGACGTATACGTCAAC Locus tag: PP3539 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: PP3540 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	PP3539	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	PP3540	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Position: -131 Score: 6.5 Sequence: CTTTACGTTAACGTAAAC Position: -80 Score: 5.9 Sequence: CTTTACGTAAACGTAAAT Locus tag: PP4063 Name: aacS Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
	PP4063	aacS	Acetoacetyl-CoA synthetase (EC 6.2.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD