Regulon of LiuR in Idiomarina loihiensis L2TR

Properties
Regulator type:	Transcription factor
TF locus tag:	IL0873
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Alteromonadales
Statistics of regulated genes:
- Genes	13
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 65 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Alteromonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -34 Score: 6.4 Sequence: GTTTACGTTAACGTAAAG Locus tag: IL0872 Name: ivdA Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
	IL0872	ivdA	3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Position: -62 Score: 6.4 Sequence: CTTTACGTTAACGTAAAC Locus tag: IL0873 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: IL0874 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: IL0875 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: IL0876 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: IL0877 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: IL0878 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) Locus tag: IL0879 Name: aacS Funciton: Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) Locus tag: IL0880 Name: IL0880 Funciton: Sensory box/GGDEF family protein Locus tag: IL0881 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	IL0873	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	IL0874	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	IL0875	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	IL0876	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	IL0877	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	IL0878	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	IL0879	aacS	Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)
	IL0880	IL0880	Sensory box/GGDEF family protein
	IL0881	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -61 Score: 5.7 Sequence: CTTTACGTAAAGGTAAAG Locus tag: IL1680 Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) Locus tag: IL1679 Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) Locus tag: IL1678 Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
	IL1680	bkdA1	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
	IL1679	bkdA2	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
	IL1678	bkdB	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)

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