Regulon of LiuR in Idiomarina baltica OS145

Properties
Regulator type:	Transcription factor
TF locus tag:	OS145_12909
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Alteromonadales
Statistics of regulated genes:
- Genes	14
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 65 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Alteromonadales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 6.4 Sequence: CTTTACGTTAACGTAAAC Locus tag: OS145_12909 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: OS145_12904 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: OS145_12899 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: OS145_12894 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: OS145_12889 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: OS145_12884 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) Locus tag: OS145_12879 Name: aacS Funciton: Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) Locus tag: OS145_12874 Name: IL0880 Funciton: Sensory box/GGDEF family protein Locus tag: OS145_12869 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	OS145_12909	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	OS145_12904	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	OS145_12899	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	OS145_12894	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	OS145_12889	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	OS145_12884	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	OS145_12879	aacS	Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)
	OS145_12874	IL0880	Sensory box/GGDEF family protein
	OS145_12869	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -34 Score: 6.4 Sequence: GTTTACGTTAACGTAAAG Locus tag: OS145_12914 Name: ivdA Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
	OS145_12914	ivdA	3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Position: -140 Score: 5.3 Sequence: GTTGCCGTTTACGTCAAC Locus tag: OS145_06047 Name: ldh Funciton: Leucine dehydrogenase (EC 1.4.1.9)
	OS145_06047	ldh	Leucine dehydrogenase (EC 1.4.1.9)
Position: -61 Score: 5.7 Sequence: CTTTACGTAAAGGTAAAG Locus tag: OS145_01872 Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) Locus tag: OS145_01867 Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) Locus tag: OS145_01862 Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
	OS145_01872	bkdA1	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
	OS145_01867	bkdA2	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
	OS145_01862	bkdB	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)

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