Regulon of NtrC in Rhodospirillum centenum SW

Properties
Regulator type:	Transcription factor
TF locus tag:	RC1_0129
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Rhodospirillales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 40 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -166 Score: 5 Sequence: TGCCCATTTTATGGGCA Locus tag: RC1_1257 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: RC1_1258 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	RC1_1257	glnB	Nitrogen regulatory protein P-II
	RC1_1258	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -186 Score: 5.1 Sequence: TGCACAAGAATTGTGCA Locus tag: RC1_2783 Name: glnK Funciton: Nitrogen regulatory protein P-II
	RC1_2783	glnK	Nitrogen regulatory protein P-II
Position: -278 Score: 4.8 Sequence: TGCCCAATTCCTGTGCA Position: -170 Score: 4.8 Sequence: TGCACAATCCTTGGGCA Locus tag: RC1_2743 Name: amtB Funciton: Ammonium transporter
	RC1_2743	amtB	Ammonium transporter
Position: -38 Score: 4.5 Sequence: CGCCTAATTTTCATGCA Locus tag: RC1_0127 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: RC1_0128 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: RC1_0129 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: RC1_0130 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-) Locus tag: RC1_0131 Name: ntrX Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
	RC1_0127	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	RC1_0128	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	RC1_0129	ntrC	Nitrogen regulation protein NR(I), Fis family
	RC1_0130	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	RC1_0131	ntrX	Nitrogen assimilation transcriptional regulator NtrX, Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD