Profile of regulator NtrC in Rhodospirillales
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Nitrogen assimilation |
| Effector: |
Phosphorylated NtrB, signal histidine kinase |
| Regulog: |
NtrC - Rhodospirillales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Rhodospirillum rubrum ATCC 11170
|
|
Rru_A2048 |
potA |
-114 |
3.8 |
CGCCCGTATTTAAGGCA |
|
Rru_A2048 |
potA |
-153 |
4.5 |
TGCAAAAATAATGGGCA |
|
Rru_A1129 |
amtB |
-160 |
3.9 |
TGCCCGCTTTACGGGCA |
|
Rru_A2085 |
glnB |
-194 |
4.7 |
TGCCTATATTTCGGGCA |
|
Rru_A1676 |
nifR3 |
-162 |
4.6 |
TGCCTAATATTTAACCA |
|
Magnetospirillum magnetotacticum MS-1
|
|
Magn03010461 |
glnK |
-241 |
4.2 |
CGCTCAAGATTCGTGCG |
|
Magn03007796 |
amtB2 |
-159 |
4.6 |
TGATTAAATTTTATGCA |
|
Magn03011018 |
nrtA3 |
-299 |
4.2 |
AGATTAAAATTTGTGCA |
|
Magn03011147 |
glnB |
-162 |
4.7 |
TGCCCATGAATTAGGCG |
|
Magn03006007 |
glnB |
-116 |
3.8 |
TGCCTGTTTCGTGCGCA |
|
Magn03007966 |
nifR3 |
-20 |
4.6 |
TGCATAATAAATACGCA |
|
Magnetospirillum magneticum AMB-1
|
|
amb0014 |
amtB |
-189 |
4.3 |
TGCCCAAAACTTCATCA |
|
amb0014 |
amtB |
-220 |
4.2 |
AGCACAAAATTTGACCA |
|
amb0013 |
glnK |
-241 |
4.2 |
CGCTCAAGATTCGTGCG |
|
amb1969 |
amtB2 |
-205 |
4.2 |
TGCTCAAATATTCACCA |
|
amb1969 |
amtB2 |
-177 |
4.3 |
AGCTTATTAATTAAGCA |
|
amb1969 |
amtB2 |
-125 |
4.3 |
CGCCCACTTAATGTGCA |
|
amb0537 |
nrtA |
-297 |
4.3 |
CGATTAAATTTTAAGCA |
|
amb0534 |
nrtA2 |
-289 |
4.2 |
TGTTTATTTTTTAGGCA |
|
amb0695 |
glnB |
-120 |
4.3 |
TGCCCAGGAAATAGGCG |
|
amb2365 |
nifR3 |
-110 |
4.6 |
TGCATAATAAATACGCA |
|
Azospirillum sp. B510
|
|
AZL_c00210 |
potA |
-146 |
4.7 |
TGCACAAAAAATCGGCA |
|
AZL_c00210 |
potA |
-118 |
4 |
TGATCAAGTCATAGTCA |
|
AZL_003060 |
amtB |
-276 |
4.7 |
TGCTCATTTTCTGTGCA |
|
AZL_a09490 |
amtB |
-234 |
4.3 |
TGATCGAAATTTAAGCA |
|
AZL_d00720 |
glnK |
-234 |
4 |
TGATCGTATTTTAGGCG |
|
AZL_d00720 |
glnK |
-200 |
4.2 |
CGCCCAATCAACGGGCA |
|
AZL_022880 |
amtB2 |
-18 |
4.3 |
TGCTGAAGGTTTGTGCA |
|
AZL_e03510 |
nrtA |
-196 |
4.2 |
TGCACAAAGTATGACCA |
|
AZL_019210 |
glnB |
-198 |
4.8 |
TGCACAAATATTGTTCA |
|
Rhodospirillum centenum SW
|
|
RC1_2743 |
amtB |
-278 |
4.8 |
TGCCCAATTCCTGTGCA |
|
RC1_2743 |
amtB |
-170 |
4.8 |
TGCACAATCCTTGGGCA |
|
RC1_2783 |
glnK |
-186 |
5.1 |
TGCACAAGAATTGTGCA |
|
RC1_0127 |
nifR3 |
-38 |
4.5 |
CGCCTAATTTTCATGCA |
|
RC1_1257 |
glnB |
-166 |
5 |
TGCCCATTTTATGGGCA |
|
Gluconacetobacter diazotrophicus PAl 5
|
|
Gdia_0487 |
nifR3 |
-101 |
4.7 |
TGCTTAAATCCTGGGCA |
|
Gdia_0597 |
glnK |
-174 |
4.2 |
AGCCCATAAATCAGGCA |
|
Acetobacter pasteurianus IFO 3283-01
|
|
APA01_17530 |
nifR3 |
-30 |
4.9 |
TGCCTAAATCATAGGCA |
|
Granulibacter bethesdensis CGDNIH1
|
|
GbCGDNIH1_2136 |
glnK |
-91 |
4.2 |
TGCGTACAAAATGGGCA |
|
GbCGDNIH1_1228 |
nifR3 |
-10 |
5.1 |
TGCCCAAATCATGGGCA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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