Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Magnetospirillum magneticum AMB-1

Properties
Regulator type: Transcription factor
TF locus tag: amb2367
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Rhodospirillales
Statistics of regulated genes:
- Genes 17
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -205
Score: 4.2
Sequence: TGCTCAAATATTCACCA
Position: -177
Score: 4.3
Sequence: AGCTTATTAATTAAGCA
Position: -125
Score: 4.3
Sequence: CGCCCACTTAATGTGCA
Locus tag: amb1969
Name: amtB2
Funciton: Ammonium transporter
amb1969
amtB2
Ammonium transporter
Position: -110
Score: 4.6
Sequence: TGCATAATAAATACGCA
Locus tag: amb2365
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: amb2366
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: amb2367
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: amb2368
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: amb2369
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
amb2365
nifR3
Nitrogen assimilation transcriptional regulator NtrX, Fis family
amb2366
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
amb2367
ntrC
Nitrogen regulation protein NR(I), Fis family
amb2368
ntrY
Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
amb2369
ntrX
Nitrogen assimilation transcriptional regulator NtrX, Fis family
Position: -220
Score: 4.2
Sequence: AGCACAAAATTTGACCA
Position: -189
Score: 4.3
Sequence: TGCCCAAAACTTCATCA
Locus tag: amb0014
Name: amtB
Funciton: Ammonium transporter
amb0014
amtB
Ammonium transporter
Position: -241
Score: 4.2
Sequence: CGCTCAAGATTCGTGCG
Locus tag: amb0013
Name: glnK
Funciton: Nitrogen regulatory protein P-II
amb0013
glnK
Nitrogen regulatory protein P-II
Position: -297
Score: 4.3
Sequence: CGATTAAATTTTAAGCA
Locus tag: amb0537
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: amb0536
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: amb0535
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
amb0537
nrtA
Nitrate ABC transporter, substrate-binding component
amb0536
nrtB
Nitrate ABC transporter, permease component
amb0535
nrtC
Nitrate ABC transporter, ATP-binding component
Position: -289
Score: 4.2
Sequence: TGTTTATTTTTTAGGCA
Locus tag: amb0534
Name: nrtA2
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: amb0533
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: amb0532
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: amb0531
Name: nasA
Funciton: Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
amb0534
nrtA2
Nitrate ABC transporter, substrate-binding component
amb0533
nasD
Nitrite reductase, large subunit (EC 1.7.1.4)
amb0532
nasE
Nitrite reductase, small subunit (EC 1.7.1.4)
amb0531
nasA
Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
Position: -120
Score: 4.3
Sequence: TGCCCAGGAAATAGGCG
Locus tag: amb0695
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: amb0696
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
amb0695
glnB
Nitrogen regulatory protein P-II
amb0696
glnA
Glutamine synthetase type I (EC 6.3.1.2)
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