Regulon of NtrC in Magnetospirillum magnetotacticum MS-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Magn03007968
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Rhodospirillales
Statistics of regulated genes:
- Genes	16
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 40 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -159 Score: 4.6 Sequence: TGATTAAATTTTATGCA Locus tag: Magn03007796 Name: amtB2 Funciton: Ammonium transporter
	Magn03007796	amtB2	Ammonium transporter
Position: -299 Score: 4.2 Sequence: AGATTAAAATTTGTGCA Locus tag: Magn03011018 Name: nrtA3 Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: Magn03011017 Name: nrtB3 Funciton: Nitrate ABC transporter, permease component Locus tag: Magn03011016 Name: nrtC3 Funciton: Nitrate ABC transporter, ATP-binding component Locus tag: Magn03011015 Name: nrtA2 Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: Magn03011014 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Magn03011013 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Magn03011012 Name: nasA Funciton: Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
	Magn03011018	nrtA3	Nitrate ABC transporter, substrate-binding component
	Magn03011017	nrtB3	Nitrate ABC transporter, permease component
	Magn03011016	nrtC3	Nitrate ABC transporter, ATP-binding component
	Magn03011015	nrtA2	Nitrate ABC transporter, substrate-binding component
	Magn03011014	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Magn03011013	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	Magn03011012	nasA	Assimilatory nitrate reductase large subunit (EC:1.7.99.4)
Position: -241 Score: 4.2 Sequence: CGCTCAAGATTCGTGCG Locus tag: Magn03010461 Name: glnK Funciton: Nitrogen regulatory protein P-II
	Magn03010461	glnK	Nitrogen regulatory protein P-II
Position: -20 Score: 4.6 Sequence: TGCATAATAAATACGCA Locus tag: Magn03007966 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Magn03007967 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Magn03007968 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: Magn03007969 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	Magn03007966	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Magn03007967	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Magn03007968	ntrC	Nitrogen regulation protein NR(I), Fis family
	Magn03007969	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Position: -116 Score: 3.8 Sequence: TGCCTGTTTCGTGCGCA Locus tag: Magn03006007 Name: glnB Funciton: Nitrogen regulatory protein P-II
	Magn03006007	glnB	Nitrogen regulatory protein P-II
Position: -162 Score: 4.7 Sequence: TGCCCATGAATTAGGCG Locus tag: Magn03011147 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Magn03011148 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Magn03011147	glnB	Nitrogen regulatory protein P-II
	Magn03011148	glnA	Glutamine synthetase type I (EC 6.3.1.2)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Magnetospirillum magnetotacticum MS-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --