Regulog PpsR - Rhodobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	repressor
Biological process:	Photosynthesis
Effector:	Blue light
Phylum:	Proteobacteria/alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 74 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - [Other]
By effector - Blue light
By pathway - Photosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Hyphomonas neptunium ATCC 15444
Jannaschia sp. CCS1	46	12
Loktanella vestfoldensis SKA53	44	10
Oceanicaulis alexandrii HTCC2633
Oceanicola batsensis HTCC2597
Oceanicola granulosus HTCC2516
Paracoccus denitrificans PD1222
Rhodobacter sphaeroides 2.4.1	48	12
Rhodobacterales bacterium HTCC2654
Roseobacter sp. MED193
Roseovarius nubinhibens ISM
Roseovarius sp. 217	43	9
Silicibacter TM1040
Silicibacter pomeroyi DSS-3
Sulfitobacter sp. EE-36

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
crtI	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -87 score = 5.28302 sequence = TGTCAACCAAGTCTGACA Site: position = -11 score = 5.12708 sequence = TGTCAACTAATATGGACA Gene: Jann_0143: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)	* Loktanella vestfoldensis SKA53 Site: position = -34 score = 5.41799 sequence = TGTCAACTTTGGTTTACA Site: position = -9 score = 4.03407 sequence = TGTGGGCTTATGTTGACA Site: position = -90 score = 5.47341 sequence = TGTCAACTTAGTCTGACA Gene: SKA53_12118: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -64 score = 4.87731 sequence = TGTAAACCTGACTAGACA Gene: RSP_0271: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -34 score = 5.34464 sequence = TGTCAATTAAACTAGACA Site: position = -89 score = 5.1958 sequence = TGTCAGATAAGTCTGACA Gene: ROS217_22367: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
crtB	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0142: Phytoene synthase (EC 2.5.1.32)	Loktanella vestfoldensis SKA53 Gene: SKA53_12123: Phytoene synthase (EC 2.5.1.32)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0270: Phytoene synthase (EC 2.5.1.32)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22362: Phytoene synthase (EC 2.5.1.32)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Phytoene synthase (EC 2.5.1.32)
tspO	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53 Gene: SKA53_12128: Regulatory protein TspO	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0269: Regulatory protein TspO	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22357: Regulatory protein TspO	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Regulatory protein TspO

CRON 2.
crtA	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -110 score = 5.12708 sequence = TGTCCATATTAGTTGACA Site: position = -34 score = 5.28302 sequence = TGTCAGACTTGGTTGACA Gene: Jann_0144: Spheroidene monooxygenase	* Loktanella vestfoldensis SKA53 Site: position = -116 score = 4.03407 sequence = TGTCAACATAAGCCCACA Site: position = -91 score = 5.41799 sequence = TGTAAACCAAAGTTGACA Site: position = -35 score = 5.47341 sequence = TGTCAGACTAAGTTGACA Gene: SKA53_12113: Spheroidene monooxygenase	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -111 score = 4.87731 sequence = TGTCTAGTCAGGTTTACA Gene: RSP_0272: Spheroidene monooxygenase	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -37 score = 4.47858 sequence = TGTCAACATAAGATGACC Site: position = -12 score = 5.34464 sequence = TGTCTAGTTTAATTGACA Gene: ROS217_22372: Spheroidene monooxygenase	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Spheroidene monooxygenase
bchI	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0145: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)	Loktanella vestfoldensis SKA53 Gene: SKA53_12108: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0273: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22377: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1)
bchD	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0146: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)	Loktanella vestfoldensis SKA53 Gene: SKA53_12103: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0274: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22382: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1)
bchO	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0147: Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)	Loktanella vestfoldensis SKA53 Gene: SKA53_12098: Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0275: Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22387: Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Magnesium-chelatase 30 kDa subunit (EC 6.6.1.1)

CRON 3.
hcaR	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -67 score = 5.16859 sequence = TGTAAGGTTGAGTTGACA Gene: Jann_0300: 7-hydroxymethyl chlorophyll a reductase	* Loktanella vestfoldensis SKA53 Site: position = -46 score = 5.0362 sequence = TGTAAATCAAACTGGACA Gene: SKA53_10144: 7-hydroxymethyl chlorophyll a reductase	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	7-hydroxymethyl chlorophyll a reductase

CRON 4.
Jann_1581	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -163 score = 5.24421 sequence = TGTCAATCATGATTTACA Site: position = -138 score = 4.88511 sequence = TGTCAGTTAATTGTGACA Gene: Jann_1581: antenna complex, alpha/beta subunit	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	antenna complex, alpha/beta subunit
Jann_1582	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_1582: antenna complex, alpha/beta subunit	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	antenna complex, alpha/beta subunit
pucBA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_1583: Light-harvesting 1 (B870) complex assembly	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0315: Light-harvesting 1 (B870) complex assembly	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting 1 (B870) complex assembly
pucB	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -169 score = 5.02914 sequence = TGTCAGCCAACACTGACA Site: position = -144 score = 4.69052 sequence = TGTCAGCGCAATGTGACA Gene: RSP_0314: Light-harvesting LHII, beta subunit A	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting LHII, beta subunit A
pucA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_6256: Light-harvesting LHII, alpha subunit A	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting LHII, alpha subunit A

CRON 5.
hemE	Hyphomonas neptunium ATCC 15444 Gene: HNE_3568: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	* Jannaschia sp. CCS1 Site: position = -86 score = 5.38269 sequence = TGTCAACTTGGCTTGACA Gene: Jann_3846: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Loktanella vestfoldensis SKA53 Gene: SKA53_08221: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_10034: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Oceanicola batsensis HTCC2597 Gene: OB2597_10471: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Oceanicola granulosus HTCC2516 Gene: OG2516_09478: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Paracoccus denitrificans PD1222 Gene: Pden_3629: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	* Rhodobacter sphaeroides 2.4.1 Site: position = -84 score = 4.73872 sequence = TGTCCATTTGCCCTGACA Gene: RSP_0680: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_10069: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Roseobacter sp. MED193 Gene: MED193_11118: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Roseovarius nubinhibens ISM Gene: ISM_11815: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Roseovarius sp. 217 Gene: ROS217_17562: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Silicibacter TM1040 Gene: TM1040_2528: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Silicibacter pomeroyi DSS-3 Gene: SPO3648: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Sulfitobacter sp. EE-36 Gene: EE36_05193: Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)

CRON 6.
bchE	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -34 score = 4.92565 sequence = TGTCAACTGAAATGGACA Gene: RSP_0281: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) (EC 1.14.13.81)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -58 score = 5.73527 sequence = TGTCAAGTTAAGTTGACA Gene: ROS217_16035: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) (EC 1.14.13.81)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) (EC 1.14.13.81)
bchJ	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0280: Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_16030: Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide

CRON 7.
hemC	Hyphomonas neptunium ATCC 15444 Gene: HNE_3227: Porphobilinogen deaminase (EC 2.5.1.61)	* Jannaschia sp. CCS1 Site: position = -34 score = 5.38269 sequence = TGTCAAGCCAAGTTGACA Gene: Jann_3845: Porphobilinogen deaminase (EC 2.5.1.61)	* Loktanella vestfoldensis SKA53 Site: position = -35 score = 5.12913 sequence = TGTCAGGCCAGATTGACA Gene: SKA53_08216: Porphobilinogen deaminase (EC 2.5.1.61)	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_10709: Porphobilinogen deaminase (EC 2.5.1.61)	Oceanicola batsensis HTCC2597 Gene: OB2597_10476: Porphobilinogen deaminase (EC 2.5.1.61)	Oceanicola granulosus HTCC2516 Gene: OG2516_09473: Porphobilinogen deaminase (EC 2.5.1.61)	Paracoccus denitrificans PD1222 Gene: Pden_3630: Porphobilinogen deaminase (EC 2.5.1.61)	* Rhodobacter sphaeroides 2.4.1 Site: position = -35 score = 4.73872 sequence = TGTCAGGGCAAATGGACA Gene: RSP_0679: Porphobilinogen deaminase (EC 2.5.1.61)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_10064: Porphobilinogen deaminase (EC 2.5.1.61)	Roseobacter sp. MED193 Gene: MED193_11123: Porphobilinogen deaminase (EC 2.5.1.61)	Roseovarius nubinhibens ISM Gene: ISM_11820: Porphobilinogen deaminase (EC 2.5.1.61)	Roseovarius sp. 217 Gene: ROS217_17557: Porphobilinogen deaminase (EC 2.5.1.61)	Silicibacter TM1040 Gene: TM1040_2529: Porphobilinogen deaminase (EC 2.5.1.61)	Silicibacter pomeroyi DSS-3 Gene: SPO3649: Porphobilinogen deaminase (EC 2.5.1.61)	Sulfitobacter sp. EE-36 Gene: EE36_05198: Porphobilinogen deaminase (EC 2.5.1.61)	Porphobilinogen deaminase (EC 2.5.1.61)

CRON 8.
crtE	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -98 score = 5.20023 sequence = TGTCAGTCAATGTTGACA Site: position = -67 score = 4.79848 sequence = TGTCCAGTCTGATTTACA Gene: Jann_0182: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)	* Loktanella vestfoldensis SKA53 Site: position = -71 score = 4.49092 sequence = TGTATCGTTTGATTTACA Site: position = -45 score = 5.21776 sequence = TGTAAACTAAAATAGACA Gene: SKA53_12318: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -90 score = 5.06974 sequence = TGTAAGAAAAAGTTGACA Gene: RSP_0265: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -63 score = 4.96068 sequence = TGTCCAGTATGATTTACA Site: position = -38 score = 4.46251 sequence = TGTCAGATTTGTGATACA Gene: ROS217_22342: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
crtF	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0181: Hydroxyneurosporene methyltransferase (EC 2.1.1.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12323: Hydroxyneurosporene methyltransferase (EC 2.1.1.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0264: Hydroxyneurosporene methyltransferase (EC 2.1.1.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22337: Hydroxyneurosporene methyltransferase (EC 2.1.1.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Hydroxyneurosporene methyltransferase (EC 2.1.1.-)

CRON 9.
crtD	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -50 score = 4.79848 sequence = TGTAAATCAGACTGGACA Site: position = -19 score = 5.20023 sequence = TGTCAACATTGACTGACA Gene: Jann_0183: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)	* Loktanella vestfoldensis SKA53 Site: position = -61 score = 5.21776 sequence = TGTCTATTTTAGTTTACA Site: position = -35 score = 4.49092 sequence = TGTAAATCAAACGATACA Gene: SKA53_12313: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -72 score = 5.06974 sequence = TGTCAACTTTTTCTTACA Gene: RSP_0266: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -72 score = 4.46251 sequence = TGTATCACAAATCTGACA Site: position = -47 score = 4.96068 sequence = TGTAAATCATACTGGACA Gene: ROS217_22347: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
ctrC	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0184: Hydroxyneurosporene synthase	Loktanella vestfoldensis SKA53 Gene: SKA53_12308: Hydroxyneurosporene synthase	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0267: Hydroxyneurosporene synthase	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22352: Hydroxyneurosporene synthase	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Hydroxyneurosporene synthase

CRON 10.
bchG	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -56 score = 4.53242 sequence = CGTAAACCTGAGTTTACA Site: position = -21 score = 5.3815 sequence = TGTCAGCCTAAGCTGACA Gene: Jann_0165: Bacteriochlorophyll/chlorophyll synthetase	* Loktanella vestfoldensis SKA53 Site: position = -55 score = 5.2039 sequence = TGTAAGCTTTAGTTTACA Site: position = -20 score = 5.11884 sequence = TGTCATCTTAGACTGACA Gene: SKA53_10604: Bacteriochlorophyll/chlorophyll synthetase	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -21 score = 4.21062 sequence = CGTCATGCTTAGGTGACA Site: position = 5 score = 5.03869 sequence = TGTCAATCTATCCTTACA Gene: RSP_0279: Bacteriochlorophyll/chlorophyll synthetase	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -20 score = 5.16267 sequence = TGTATAGTTTAATTGACA Site: position = 5 score = 4.1169 sequence = TGTCACAGAGTCCTTACA Gene: ROS217_22192: Bacteriochlorophyll/chlorophyll synthetase	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Bacteriochlorophyll/chlorophyll synthetase
pucC	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0166: Bacteriochlorophyll synthase 44.5 kDa chain	Loktanella vestfoldensis SKA53 Gene: SKA53_10609: Bacteriochlorophyll synthase 44.5 kDa chain	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0278: Bacteriochlorophyll synthase 44.5 kDa chain	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22187: Bacteriochlorophyll synthase 44.5 kDa chain	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Bacteriochlorophyll synthase 44.5 kDa chain
bchP	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0167: Geranylgeranyl hydrogenase BchP; Geranylgeranyl reductase (EC 1.3.1.83)	Loktanella vestfoldensis SKA53 Gene: SKA53_10614: Geranylgeranyl hydrogenase BchP; Geranylgeranyl reductase (EC 1.3.1.83)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0277: Geranylgeranyl hydrogenase BchP; Geranylgeranyl reductase (EC 1.3.1.83)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22182: Geranylgeranyl hydrogenase BchP; Geranylgeranyl reductase (EC 1.3.1.83)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Geranylgeranyl hydrogenase BchP; Geranylgeranyl reductase (EC 1.3.1.83)

CRON 11.
bchC	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -125 score = 4.95241 sequence = TGTCTATTCACGTTGACA Site: position = -99 score = 5.44958 sequence = TGTCAGGTTAAACTGACA Gene: Jann_0180: Chlorophyll synthesis pathway, bchC	* Loktanella vestfoldensis SKA53 Site: position = -181 score = 5.14881 sequence = TGTAAGGTAAAGTTTACA Site: position = -156 score = 4.84589 sequence = TGTCTAAAAGAATTGACA Gene: SKA53_12328: Chlorophyll synthesis pathway, bchC	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -116 score = 5.32474 sequence = TGTCCAATAAAGTTGACA Site: position = -90 score = 4.41339 sequence = TGTCCCGTTAATGTTACA Gene: RSP_0263: Chlorophyll synthesis pathway, bchC	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -187 score = 4.6392 sequence = TGTCAAGTCAGCCTGACG Site: position = -153 score = 5.11017 sequence = TGTAAAGAAAGATTGACA Site: position = -127 score = 4.64746 sequence = TGTCCGGTTACACTTACA Gene: ROS217_22332: Chlorophyll synthesis pathway, bchC	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Chlorophyll synthesis pathway, bchC
bchX	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0179: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12333: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0262: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22327: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
bchY	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0178: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12343: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0261: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22322: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
bchZ	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0177: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12348: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0260: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22317: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
pufQ	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0176: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes	Loktanella vestfoldensis SKA53 Gene: SKA53_12353: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0259: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22312: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
pufK	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_6109: Transcriptional regulatory protein pufK	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Transcriptional regulatory protein pufK
pufB	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0175: Light-harvesting LHI, beta subunit	Loktanella vestfoldensis SKA53 Gene: SKA53_12358: Light-harvesting LHI, beta subunit	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_6108: Light-harvesting LHI, beta subunit	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22307: Light-harvesting LHI, beta subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting LHI, beta subunit
pufA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0174: Light-harvesting LHI, alpha subunit	Loktanella vestfoldensis SKA53 Gene: SKA53_12363: Light-harvesting LHI, alpha subunit	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0258: Light-harvesting LHI, alpha subunit	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22302: Light-harvesting LHI, alpha subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting LHI, alpha subunit
pufL	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0173: Photosynthetic reaction center L subunit	Loktanella vestfoldensis SKA53 Gene: SKA53_12368: Photosynthetic reaction center L subunit	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0257: Photosynthetic reaction center L subunit	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22297: Photosynthetic reaction center L subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Photosynthetic reaction center L subunit
pufM	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0172: Photosynthetic reaction center M subunit	Loktanella vestfoldensis SKA53 Gene: SKA53_12373: Photosynthetic reaction center M subunit	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0256: Photosynthetic reaction center M subunit	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22292: Photosynthetic reaction center M subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Photosynthetic reaction center M subunit
pufX	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53 Gene: SKA53_12378: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0255: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
dxsA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0170: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Loktanella vestfoldensis SKA53 Gene: SKA53_12383: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0254: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22282: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
SKA53_12338	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53 Gene: SKA53_12338: hypothetical protein	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	hypothetical protein
pufC	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0171: Photosynthetic reaction center cytochrome c subunit	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22287: Photosynthetic reaction center cytochrome c subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Photosynthetic reaction center cytochrome c subunit

CRON 12.
ppaA	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -262 score = 5.36312 sequence = TGTCAATCTAAACTTACA Site: position = -119 score = 4.57817 sequence = TGTCTAATTTCTATGACA Gene: Jann_0163: PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation	* Loktanella vestfoldensis SKA53 Site: position = -233 score = 5.45844 sequence = TGTCAATTTACTTTGACA Gene: SKA53_12018: PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -296 score = 5.04989 sequence = TGTCAATTCTGACTTACA Site: position = -152 score = 5.38292 sequence = TGTCAATTTTCTTTGACA Gene: RSP_0283: PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -218 score = 5.27215 sequence = TGTCAGGATAATTTGACA Gene: ROS217_22202: PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation
ppsR	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0164: Regulator of carotenoid biosynthesis PpsR	Loktanella vestfoldensis SKA53 Gene: SKA53_12013: Regulator of carotenoid biosynthesis PpsR	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0282: Regulator of carotenoid biosynthesis PpsR	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22197: Regulator of carotenoid biosynthesis PpsR	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Regulator of carotenoid biosynthesis PpsR

CRON 13.
bchF	Hyphomonas neptunium ATCC 15444	* Jannaschia sp. CCS1 Site: position = -73 score = 5.36312 sequence = TGTAAGTTTAGATTGACA Site: position = -216 score = 4.57817 sequence = TGTCATAGAAATTAGACA Gene: Jann_0162: 2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)	* Loktanella vestfoldensis SKA53 Site: position = -68 score = 5.39417 sequence = TGTAAGTTAAAGTTGACA Site: position = -192 score = 5.45844 sequence = TGTCAAAGTAAATTGACA Gene: SKA53_12023: 2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -94 score = 5.04989 sequence = TGTAAGTCAGAATTGACA Site: position = -238 score = 5.38292 sequence = TGTCAAAGAAAATTGACA Gene: RSP_0284: 2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	* Roseovarius sp. 217 Site: position = -76 score = 5.47394 sequence = TGTAAATTATAATTGACA Site: position = -247 score = 5.27215 sequence = TGTCAAATTATCCTGACA Gene: ROS217_22207: 2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)
bchN	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0161: Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12028: Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0285: Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22212: Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-independent protochlorophyllide reductase subunit N (EC 1.18.-.-)
bchB	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0160: Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12033: Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0286: Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22217: Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-independent protochlorophyllide reductase subunit B (EC 1.18.-.-)
bchH	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0159: Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)	Loktanella vestfoldensis SKA53 Gene: SKA53_12038: Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0287: Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22222: Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Protoporphyrin IX Mg-chelatase subunit H (EC 6.6.1.1)
bchL	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0158: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_12043: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0288: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22227: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL (EC 1.18.-.-)
bchM	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0157: Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)	Loktanella vestfoldensis SKA53 Gene: SKA53_12048: Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0289: Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22232: Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Mg-protoporphyrin O-methyltransferase (EC 2.1.1.11)
pucC2	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0156: Light-harvesting 1 (B870) complex assembly	Loktanella vestfoldensis SKA53 Gene: SKA53_12053: Light-harvesting 1 (B870) complex assembly	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0290: Light-harvesting 1 (B870) complex assembly	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22237: Light-harvesting 1 (B870) complex assembly	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Light-harvesting 1 (B870) complex assembly
puhA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0155: Photosynthetic reaction center H subunit	Loktanella vestfoldensis SKA53 Gene: SKA53_12058: Photosynthetic reaction center H subunit	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0291: Photosynthetic reaction center H subunit	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22242: Photosynthetic reaction center H subunit	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Photosynthetic reaction center H subunit
RSP_0292	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0154: Putative photosynthetic complex assembly protein	Loktanella vestfoldensis SKA53 Gene: SKA53_12063: Putative photosynthetic complex assembly protein	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0292: Putative photosynthetic complex assembly protein	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22247: Putative photosynthetic complex assembly protein	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Putative photosynthetic complex assembly protein
RSP_0293	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0153: hypothetical protein	Loktanella vestfoldensis SKA53 Gene: SKA53_12068: hypothetical protein	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0293: hypothetical protein	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22252: hypothetical protein	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	hypothetical protein
RSP_6110	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0152: hypothetical protein	Loktanella vestfoldensis SKA53 Gene: SKA53_12073: hypothetical protein	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_6110: hypothetical protein	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22257: hypothetical protein	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	hypothetical protein
acsF	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0151: Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)	Loktanella vestfoldensis SKA53 Gene: SKA53_12078: Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0294: Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22262: Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) (EC 1.14.13.81)
RSP_0295	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0150: hypothetical protein	Loktanella vestfoldensis SKA53 Gene: SKA53_12083: hypothetical protein	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_0295: hypothetical protein	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22267: hypothetical protein	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	hypothetical protein
hemA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0149: 5-aminolevulinate synthase (EC 2.3.1.37)	Loktanella vestfoldensis SKA53 Gene: SKA53_12088: 5-aminolevulinate synthase (EC 2.3.1.37)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217 Gene: ROS217_22272: 5-aminolevulinate synthase (EC 2.3.1.37)	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	5-aminolevulinate synthase (EC 2.3.1.37)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PpsR - Rhodobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --