Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pufB gene

Properties
Regulog: PpsR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Photosynthesis
Effector: Blue light
Phylum: Proteobacteria/alpha
Built upon 74 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -125
Score: 4.95241
Sequence: TGTCTATTCACGTTGACA
Position: -99
Score: 5.44958
Sequence: TGTCAGGTTAAACTGACA
Locus tag: Jann_0180
Name: bchC
Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: Jann_0179
Name: bchX
Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: Jann_0178
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: Jann_0177
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: Jann_0176
Name: pufQ
Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: Jann_0175
Name: pufB
Funciton: Light-harvesting LHI, beta subunit
Locus tag: Jann_0174
Name: pufA
Funciton: Light-harvesting LHI, alpha subunit
Locus tag: Jann_0173
Name: pufL
Funciton: Photosynthetic reaction center L subunit
Locus tag: Jann_0172
Name: pufM
Funciton: Photosynthetic reaction center M subunit
Locus tag: Jann_0171
Name: pufC
Funciton: Photosynthetic reaction center cytochrome c subunit
Locus tag: Jann_0170
Name: dxsA
Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
bchC-bchX-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-pufC-dxsA -125 5 TGTCTATTCACGTTGACA Jann_0180
-99 5.4 TGTCAGGTTAAACTGACA
Loktanella vestfoldensis SKA53
Position: -181
Score: 5.14881
Sequence: TGTAAGGTAAAGTTTACA
Position: -156
Score: 4.84589
Sequence: TGTCTAAAAGAATTGACA
Locus tag: SKA53_12328
Name: bchC
Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: SKA53_12333
Name: bchX
Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: SKA53_12338
Name: null
Funciton: hypothetical protein
Locus tag: SKA53_12343
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: SKA53_12348
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: SKA53_12353
Name: pufQ
Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: SKA53_12358
Name: pufB
Funciton: Light-harvesting LHI, beta subunit
Locus tag: SKA53_12363
Name: pufA
Funciton: Light-harvesting LHI, alpha subunit
Locus tag: SKA53_12368
Name: pufL
Funciton: Photosynthetic reaction center L subunit
Locus tag: SKA53_12373
Name: pufM
Funciton: Photosynthetic reaction center M subunit
Locus tag: SKA53_12378
Name: null
Funciton: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: SKA53_12383
Name: dxsA
Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
bchC-bchX-SKA53_12338-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-SKA53_12378-dxsA -181 5.1 TGTAAGGTAAAGTTTACA SKA53_12328
-156 4.8 TGTCTAAAAGAATTGACA
Rhodobacter sphaeroides 2.4.1
Position: -116
Score: 5.32474
Sequence: TGTCCAATAAAGTTGACA
Position: -90
Score: 4.41339
Sequence: TGTCCCGTTAATGTTACA
Locus tag: RSP_0263
Name: bchC
Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: RSP_0262
Name: bchX
Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: RSP_0261
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: RSP_0260
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: RSP_0259
Name: pufQ
Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: RSP_6109
Name: pufK
Funciton: Transcriptional regulatory protein pufK
Locus tag: RSP_6108
Name: pufB
Funciton: Light-harvesting LHI, beta subunit
Locus tag: RSP_0258
Name: pufA
Funciton: Light-harvesting LHI, alpha subunit
Locus tag: RSP_0257
Name: pufL
Funciton: Photosynthetic reaction center L subunit
Locus tag: RSP_0256
Name: pufM
Funciton: Photosynthetic reaction center M subunit
Locus tag: RSP_0255
Name: pufX
Funciton: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: RSP_0254
Name: dxsA
Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
bchC-bchX-bchY-bchZ-pufQ-pufK-pufB-pufA-pufL-pufM-pufX-dxsA -116 5.3 TGTCCAATAAAGTTGACA RSP_0263
-90 4.4 TGTCCCGTTAATGTTACA
Roseovarius sp. 217
Position: -187
Score: 4.6392
Sequence: TGTCAAGTCAGCCTGACG
Position: -153
Score: 5.11017
Sequence: TGTAAAGAAAGATTGACA
Position: -127
Score: 4.64746
Sequence: TGTCCGGTTACACTTACA
Locus tag: ROS217_22332
Name: bchC
Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: ROS217_22327
Name: bchX
Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: ROS217_22322
Name: bchY
Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: ROS217_22317
Name: bchZ
Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: ROS217_22312
Name: pufQ
Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: ROS217_22307
Name: pufB
Funciton: Light-harvesting LHI, beta subunit
Locus tag: ROS217_22302
Name: pufA
Funciton: Light-harvesting LHI, alpha subunit
Locus tag: ROS217_22297
Name: pufL
Funciton: Photosynthetic reaction center L subunit
Locus tag: ROS217_22292
Name: pufM
Funciton: Photosynthetic reaction center M subunit
Locus tag: ROS217_22287
Name: pufC
Funciton: Photosynthetic reaction center cytochrome c subunit
Locus tag: ROS217_22282
Name: dxsA
Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)
bchC-bchX-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-pufC-dxsA -187 4.6 TGTCAAGTCAGCCTGACG ROS217_22332
-153 5.1 TGTAAAGAAAGATTGACA
-127 4.6 TGTCCGGTTACACTTACA