Profile of regulator PpsR in Rhodobacterales
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Photosynthesis |
| Effector: | Blue light |
| Regulog: | PpsR - Rhodobacterales |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - [Other]
- By effector - Blue light
- By pathway - Photosynthesis
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Jannaschia sp. CCS1 | |||||
| Jann_0144 | crtA | -110 | 5.1 | TGTCCATATTAGTTGACA | |
| Jann_0162 | bchF | -73 | 5.4 | TGTAAGTTTAGATTGACA | |
| Jann_0144 | crtA | -34 | 5.3 | TGTCAGACTTGGTTGACA | |
| Jann_0300 | hcaR | -67 | 5.2 | TGTAAGGTTGAGTTGACA | |
| Jann_0143 | crtI | -87 | 5.3 | TGTCAACCAAGTCTGACA | |
| Jann_0143 | crtI | -11 | 5.1 | TGTCAACTAATATGGACA | |
| Jann_0163 | ppaA | -262 | 5.4 | TGTCAATCTAAACTTACA | |
| Jann_0163 | ppaA | -119 | 4.6 | TGTCTAATTTCTATGACA | |
| Jann_0180 | bchC | -125 | 5 | TGTCTATTCACGTTGACA | |
| Jann_0180 | bchC | -99 | 5.4 | TGTCAGGTTAAACTGACA | |
| Jann_0165 | bchG | -56 | 4.5 | CGTAAACCTGAGTTTACA | |
| Jann_0165 | bchG | -21 | 5.4 | TGTCAGCCTAAGCTGACA | |
| Jann_0183 | crtD | -50 | 4.8 | TGTAAATCAGACTGGACA | |
| Jann_0183 | crtD | -19 | 5.2 | TGTCAACATTGACTGACA | |
| Jann_0182 | crtE | -98 | 5.2 | TGTCAGTCAATGTTGACA | |
| Jann_0182 | crtE | -67 | 4.8 | TGTCCAGTCTGATTTACA | |
| Jann_3845 | hemC | -34 | 5.4 | TGTCAAGCCAAGTTGACA | |
| Jann_3846 | hemE | -86 | 5.4 | TGTCAACTTGGCTTGACA | |
| Jann_1581 | null | -163 | 5.2 | TGTCAATCATGATTTACA | |
| Jann_1581 | null | -138 | 4.9 | TGTCAGTTAATTGTGACA | |
| Jann_0162 | bchF | -216 | 4.6 | TGTCATAGAAATTAGACA | |
| Loktanella vestfoldensis SKA53 | |||||
| SKA53_10144 | hcaR | -46 | 5 | TGTAAATCAAACTGGACA | |
| SKA53_12113 | crtA | -116 | 4 | TGTCAACATAAGCCCACA | |
| SKA53_12023 | bchF | -68 | 5.4 | TGTAAGTTAAAGTTGACA | |
| SKA53_12018 | ppaA | -233 | 5.5 | TGTCAATTTACTTTGACA | |
| SKA53_12328 | bchC | -181 | 5.1 | TGTAAGGTAAAGTTTACA | |
| SKA53_12328 | bchC | -156 | 4.8 | TGTCTAAAAGAATTGACA | |
| SKA53_10604 | bchG | -55 | 5.2 | TGTAAGCTTTAGTTTACA | |
| SKA53_10604 | bchG | -20 | 5.1 | TGTCATCTTAGACTGACA | |
| SKA53_12313 | crtD | -61 | 5.2 | TGTCTATTTTAGTTTACA | |
| SKA53_12313 | crtD | -35 | 4.5 | TGTAAATCAAACGATACA | |
| SKA53_12318 | crtE | -71 | 4.5 | TGTATCGTTTGATTTACA | |
| SKA53_12318 | crtE | -45 | 5.2 | TGTAAACTAAAATAGACA | |
| SKA53_08216 | hemC | -35 | 5.1 | TGTCAGGCCAGATTGACA | |
| SKA53_12118 | crtI | -34 | 5.4 | TGTCAACTTTGGTTTACA | |
| SKA53_12118 | crtI | -9 | 4 | TGTGGGCTTATGTTGACA | |
| SKA53_12023 | bchF | -192 | 5.5 | TGTCAAAGTAAATTGACA | |
| SKA53_12113 | crtA | -91 | 5.4 | TGTAAACCAAAGTTGACA | |
| SKA53_12113 | crtA | -35 | 5.5 | TGTCAGACTAAGTTGACA | |
| SKA53_12118 | crtI | -90 | 5.5 | TGTCAACTTAGTCTGACA | |
| Rhodobacter sphaeroides 2.4.1 | |||||
| RSP_0271 | crtI | -64 | 4.9 | TGTAAACCTGACTAGACA | |
| RSP_0272 | crtA | -111 | 4.9 | TGTCTAGTCAGGTTTACA | |
| RSP_0284 | bchF | -94 | 5 | TGTAAGTCAGAATTGACA | |
| RSP_0283 | ppaA | -296 | 5 | TGTCAATTCTGACTTACA | |
| RSP_0283 | ppaA | -152 | 5.4 | TGTCAATTTTCTTTGACA | |
| RSP_0263 | bchC | -116 | 5.3 | TGTCCAATAAAGTTGACA | |
| RSP_0263 | bchC | -90 | 4.4 | TGTCCCGTTAATGTTACA | |
| RSP_0279 | bchG | -21 | 4.2 | CGTCATGCTTAGGTGACA | |
| RSP_0279 | bchG | 5 | 5 | TGTCAATCTATCCTTACA | |
| RSP_0266 | crtD | -72 | 5.1 | TGTCAACTTTTTCTTACA | |
| RSP_0265 | crtE | -90 | 5.1 | TGTAAGAAAAAGTTGACA | |
| RSP_0679 | hemC | -35 | 4.7 | TGTCAGGGCAAATGGACA | |
| RSP_0281 | bchE | -34 | 4.9 | TGTCAACTGAAATGGACA | |
| RSP_0680 | hemE | -84 | 4.7 | TGTCCATTTGCCCTGACA | |
| RSP_0314 | pucB | -169 | 5 | TGTCAGCCAACACTGACA | |
| RSP_0314 | pucB | -144 | 4.7 | TGTCAGCGCAATGTGACA | |
| RSP_0284 | bchF | -238 | 5.4 | TGTCAAAGAAAATTGACA | |
| Roseovarius sp. 217 | |||||
| ROS217_22367 | crtI | -34 | 5.3 | TGTCAATTAAACTAGACA | |
| ROS217_22202 | ppaA | -218 | 5.3 | TGTCAGGATAATTTGACA | |
| ROS217_22332 | bchC | -187 | 4.6 | TGTCAAGTCAGCCTGACG | |
| ROS217_22332 | bchC | -153 | 5.1 | TGTAAAGAAAGATTGACA | |
| ROS217_22332 | bchC | -127 | 4.6 | TGTCCGGTTACACTTACA | |
| ROS217_22192 | bchG | -20 | 5.2 | TGTATAGTTTAATTGACA | |
| ROS217_22192 | bchG | 5 | 4.1 | TGTCACAGAGTCCTTACA | |
| ROS217_22347 | crtD | -72 | 4.5 | TGTATCACAAATCTGACA | |
| ROS217_22347 | crtD | -47 | 5 | TGTAAATCATACTGGACA | |
| ROS217_22342 | crtE | -63 | 5 | TGTCCAGTATGATTTACA | |
| ROS217_22342 | crtE | -38 | 4.5 | TGTCAGATTTGTGATACA | |
| ROS217_16035 | bchE | -58 | 5.7 | TGTCAAGTTAAGTTGACA | |
| ROS217_22367 | crtI | -89 | 5.2 | TGTCAGATAAGTCTGACA | |
| ROS217_22207 | bchF | -76 | 5.5 | TGTAAATTATAATTGACA | |
| ROS217_22372 | crtA | -37 | 4.5 | TGTCAACATAAGATGACC | |
| ROS217_22372 | crtA | -12 | 5.3 | TGTCTAGTTTAATTGACA | |
| ROS217_22207 | bchF | -247 | 5.3 | TGTCAAATTATCCTGACA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |