Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing crtB gene

Properties
Regulog: PpsR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Photosynthesis
Effector: Blue light
Phylum: Proteobacteria/alpha
Built upon 74 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -87
Score: 5.28302
Sequence: TGTCAACCAAGTCTGACA
Position: -11
Score: 5.12708
Sequence: TGTCAACTAATATGGACA
Locus tag: Jann_0143
Name: crtI
Funciton: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
Locus tag: Jann_0142
Name: crtB
Funciton: Phytoene synthase (EC 2.5.1.32)
crtI-crtB -87 5.3 TGTCAACCAAGTCTGACA Jann_0143
-11 5.1 TGTCAACTAATATGGACA
Loktanella vestfoldensis SKA53
Position: -90
Score: 5.47341
Sequence: TGTCAACTTAGTCTGACA
Position: -34
Score: 5.41799
Sequence: TGTCAACTTTGGTTTACA
Position: -9
Score: 4.03407
Sequence: TGTGGGCTTATGTTGACA
Locus tag: SKA53_12118
Name: crtI
Funciton: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
Locus tag: SKA53_12123
Name: crtB
Funciton: Phytoene synthase (EC 2.5.1.32)
Locus tag: SKA53_12128
Name: tspO
Funciton: Regulatory protein TspO
crtI-crtB-tspO -90 5.5 TGTCAACTTAGTCTGACA SKA53_12118
-34 5.4 TGTCAACTTTGGTTTACA
-9 4 TGTGGGCTTATGTTGACA
Rhodobacter sphaeroides 2.4.1
Position: -64
Score: 4.87731
Sequence: TGTAAACCTGACTAGACA
Locus tag: RSP_0271
Name: crtI
Funciton: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
Locus tag: RSP_0270
Name: crtB
Funciton: Phytoene synthase (EC 2.5.1.32)
Locus tag: RSP_0269
Name: tspO
Funciton: Regulatory protein TspO
crtI-crtB-tspO -64 4.9 TGTAAACCTGACTAGACA RSP_0271
Roseovarius sp. 217
Position: -89
Score: 5.1958
Sequence: TGTCAGATAAGTCTGACA
Position: -34
Score: 5.34464
Sequence: TGTCAATTAAACTAGACA
Locus tag: ROS217_22367
Name: crtI
Funciton: Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
Locus tag: ROS217_22362
Name: crtB
Funciton: Phytoene synthase (EC 2.5.1.32)
Locus tag: ROS217_22357
Name: tspO
Funciton: Regulatory protein TspO
crtI-crtB-tspO -89 5.2 TGTCAGATAAGTCTGACA ROS217_22367
-34 5.3 TGTCAATTAAACTAGACA