Regulog NifA - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | Nitrogen fixation |
| Effector: | |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - NifA
- By TF family - Fis
- By pathway - Nitrogen fixation
| Genome | Genes | Operons |
|---|---|---|
| Acetobacter pasteurianus IFO 3283-01 | ||
| Azospirillum sp. B510 | 28 | 6 |
| Gluconacetobacter diazotrophicus PAl 5 | 30 | 5 |
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 | ||
| Magnetospirillum magnetotacticum MS-1 | 30 | 6 |
| Magnetospirillum magneticum AMB-1 | 28 | 6 |
| Rhodospirillum rubrum ATCC 11170 | 27 | 6 |
| Rhodospirillum centenum SW | 22 | 5 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| ahpC |
Gene: APA01_02050: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
|
Gene: Gdia_1423: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
|
Gene: GbCGDNIH1_0680: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
2
Magnetospirillum magnetotacticum MS-1 Gene: Magn03002950: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Gene: Magn03011119: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
Gene: amb0664: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -119 score = 4.35228 sequence = GGTCTGCTACCCGACA Gene: Rru_A2897: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
Gene: RC1_0439: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
| CRON 2. | ||||||||||
| draT |
|
Gene: AZL_007730: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) |
|
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*
Magnetospirillum magnetotacticum MS-1 Site: position = -139 score = 4.96037 sequence = TGTGCGGAATCCGACA Site: position = -109 score = 4.64413 sequence = TGTTGCAACCCCAACA Gene: Magn03009023: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) |
*
Magnetospirillum magneticum AMB-1 Site: position = -139 score = 4.96037 sequence = TGTGCGGAATCCGACA Site: position = -109 score = 4.64413 sequence = TGTTGCAACCCCAACA Gene: amb1575: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -182 score = 5.67265 sequence = TGTCGCAAACCCGACA Site: position = -152 score = 5.05213 sequence = TGTCGCGGACCCAACA Gene: Rru_A1009: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) |
|
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37) |
| draG |
|
Gene: AZL_007740: ADP-ribosylglycohydrolase (EC 3.2.-.-) |
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|
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Gene: Magn03009024: ADP-ribosylglycohydrolase (EC 3.2.-.-) |
Gene: amb1576: ADP-ribosylglycohydrolase (EC 3.2.-.-) |
Gene: Rru_A1008: ADP-ribosylglycohydrolase (EC 3.2.-.-) |
|
ADP-ribosylglycohydrolase (EC 3.2.-.-) |
| PF03960 |
|
Gene: AZL_007750: Nitrogenase-associated protein |
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Gene: Magn03009025: Nitrogenase-associated protein |
Gene: amb1577: Nitrogenase-associated protein |
Gene: Rru_A1007: Nitrogenase-associated protein |
|
Nitrogenase-associated protein |
| CRON 3. | ||||||||||
| nifB |
|
*
Azospirillum sp. B510 Site: position = -190 score = 5.27821 sequence = TGTCGGCACCCCGACA Site: position = -139 score = 4.4313 sequence = TGTCACAATGACGACA Gene: AZL_022470: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -120 score = 4.80076 sequence = TGTCGGACATGAGACA Gene: Gdia_1576: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
*
Magnetospirillum magnetotacticum MS-1 Site: position = -135 score = 4.36909 sequence = TGTCGCATCCCCGCCC Site: position = -116 score = 5.49472 sequence = TGTCGGGGATGCGACA Gene: Magn03009032: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
*
Magnetospirillum magneticum AMB-1 Site: position = -115 score = 5.49472 sequence = TGTCGGGGATGCGACA Site: position = -135 score = 4.87724 sequence = TGTCGCGTCCCCGACC Gene: amb1583: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -130 score = 4.01944 sequence = TGTCGTAGACTCTACA Site: position = -169 score = 4.16267 sequence = TGTCGATATCCCGACC Gene: Rru_A0994: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
*
Rhodospirillum centenum SW Site: position = -157 score = 5.11512 sequence = TGTCGGCTTCCCCACA Site: position = -134 score = 5.49472 sequence = TGTCGCATCCCCGACA Gene: RC1_3690: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
| fdxN |
|
Gene: AZL_022480: 4Fe-4S ferredoxin, nitrogenase-associated |
Gene: Gdia_1575: 4Fe-4S ferredoxin, nitrogenase-associated |
|
|
Gene: Magn03009031: 4Fe-4S ferredoxin, nitrogenase-associated |
|
2
Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2720: 4Fe-4S ferredoxin, nitrogenase-associated Gene: Rru_A0995: 4Fe-4S ferredoxin, nitrogenase-associated |
Gene: RC1_3689: 4Fe-4S ferredoxin, nitrogenase-associated |
4Fe-4S ferredoxin, nitrogenase-associated |
| AZL_022490 |
|
Gene: AZL_022490: Hypothetical protein |
|
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Hypothetical protein |
| PF01816 |
|
Gene: AZL_022500: Leucine-rich FeS4 cluster domain protein |
Gene: Gdia_1574: Leucine-rich FeS4 cluster domain protein |
|
|
|
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Gene: Rru_A0996: Leucine-rich FeS4 cluster domain protein |
|
Leucine-rich FeS4 cluster domain protein |
| nifZ |
|
2
Azospirillum sp. B510 Gene: AZL_022510: Nitrogen fixation protein NifZ Gene: AZL_022520: Nitrogen fixation protein NifZ |
Gene: Gdia_1573: Nitrogen fixation protein NifZ |
|
|
Gene: Magn03009030: Nitrogen fixation protein NifZ |
Gene: amb1582: Nitrogen fixation protein NifZ |
Gene: Rru_A0997: Nitrogen fixation protein NifZ |
Gene: RC1_3688: Nitrogen fixation protein NifZ |
Nitrogen fixation protein NifZ |
| nifS2 |
|
Gene: AZL_022530: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
|
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Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
| nifT |
|
Gene: AZL_022540: Nitrogen fixation protein nifT |
Gene: Gdia_1572: Nitrogen fixation protein nifT |
|
|
Gene: Magn03009029: Nitrogen fixation protein nifT |
Gene: amb1581: Nitrogen fixation protein nifT |
Gene: Rru_A0998: Nitrogen fixation protein nifT |
Gene: RC1_3687: Nitrogen fixation protein nifT |
Nitrogen fixation protein nifT |
| sir2 |
|
Gene: AZL_022570: Conserved hypothetical protein |
Gene: Gdia_1571: Conserved hypothetical protein |
|
|
Gene: Magn03009028: Conserved hypothetical protein |
Gene: amb1580: Conserved hypothetical protein |
Gene: Rru_A0999: Conserved hypothetical protein |
Gene: RC1_3686: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 4. | ||||||||||
| nifH |
|
*
Azospirillum sp. B510 Site: position = -182 score = 5.49439 sequence = TGTCGGGACCCCGACA Gene: AZL_007710: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -156 score = 3.966 sequence = TGTCAGGCTTCGCACA Gene: Gdia_1570: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
|
|
*2
Magnetospirillum magnetotacticum MS-1 Gene: Magn03009021: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Site: position = -193 score = 4.96037 sequence = TGTCGGATTCCGCACA Site: position = -223 score = 4.64413 sequence = TGTTGGGGTTGCAACA Gene: Magn03009022: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Magnetospirillum magneticum AMB-1 Site: position = -193 score = 4.96037 sequence = TGTCGGATTCCGCACA Site: position = -223 score = 4.64413 sequence = TGTTGGGGTTGCAACA Gene: amb1574: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -192 score = 5.67265 sequence = TGTCGGGTTTGCGACA Site: position = -222 score = 5.05213 sequence = TGTTGGGTCCGCGACA Gene: Rru_A1010: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
*
Rhodospirillum centenum SW Site: position = -192 score = 5.61585 sequence = TGTCGCGTTTGCGACA Gene: RC1_3683: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
| nifD |
|
Gene: AZL_007700: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: Gdia_1569: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
|
Gene: Magn03009020: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: amb1573: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: Rru_A1011: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Gene: RC1_3682: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
| nifK |
|
Gene: AZL_007690: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: Gdia_1568: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
|
|
Gene: Magn03009019: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: amb1572: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: Rru_A1012: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Gene: RC1_3681: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) |
| nifE |
|
*
Azospirillum sp. B510 Site: position = -123 score = 4.98693 sequence = TGTCGGGTATCGCACA Site: position = -150 score = 4.36457 sequence = TGTGCGATACCCTACA Gene: AZL_007660: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
Gene: Gdia_1567: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
|
|
*
Magnetospirillum magnetotacticum MS-1 Site: position = -118 score = 5.49472 sequence = TGTCGCATCCCCGACA Gene: Magn03009017: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
*
Magnetospirillum magneticum AMB-1 Site: position = -118 score = 5.37082 sequence = TGTCGCATGTCCGACA Gene: amb1569: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -175 score = 5.36625 sequence = TGTCGTAAACCCGACA Site: position = -217 score = 4.37345 sequence = TGTCCGGCTTGCGCCA Gene: Rru_A2286: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
Gene: RC1_3680: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE |
| nifN |
|
Gene: AZL_007650: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
Gene: Gdia_1566: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
|
|
Gene: Magn03009016: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
Gene: amb1568: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
Gene: Rru_A2285: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
|
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN |
| nifX |
|
Gene: AZL_007640: Nitrogenase FeMo-cofactor carrier protein NifX |
Gene: Gdia_1565: Nitrogenase FeMo-cofactor carrier protein NifX |
|
|
Gene: Magn03009015: Nitrogenase FeMo-cofactor carrier protein NifX |
Gene: amb1567: Nitrogenase FeMo-cofactor carrier protein NifX |
Gene: Rru_A2284: Nitrogenase FeMo-cofactor carrier protein NifX |
Gene: RC1_3679: Nitrogenase FeMo-cofactor carrier protein NifX |
Nitrogenase FeMo-cofactor carrier protein NifX |
| PF03270 |
|
Gene: AZL_007630: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Gene: Gdia_1564: Conserved hypothetical protein, probably related to nitrogen fixation protein |
|
|
Gene: Magn03009014: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Gene: amb1566: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Gene: Rru_A2283: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Gene: RC1_3678: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Conserved hypothetical protein, probably related to nitrogen fixation protein |
| PF05082 |
|
Gene: AZL_007620: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Gene: Gdia_1563: Conserved hypothetical protein, probably related to nitrogen fixation protein |
|
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Gene: Magn03010723: Conserved hypothetical protein, probably related to nitrogen fixation protein |
|
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Gene: RC1_3677: Conserved hypothetical protein, probably related to nitrogen fixation protein |
Conserved hypothetical protein, probably related to nitrogen fixation protein |
| fdxB |
|
Gene: AZL_007610: Nitrogenase specific ferredoxin III protein FdxB |
Gene: Gdia_1562: Nitrogenase specific ferredoxin III protein FdxB |
|
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Gene: Magn03009013: Nitrogenase specific ferredoxin III protein FdxB |
Gene: amb1565: Nitrogenase specific ferredoxin III protein FdxB |
Gene: Rru_A2282: Nitrogenase specific ferredoxin III protein FdxB |
Gene: RC1_0482: Nitrogenase specific ferredoxin III protein FdxB |
Nitrogenase specific ferredoxin III protein FdxB |
| nifQ |
|
2
Azospirillum sp. B510 Gene: AZL_010780: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ Gene: AZL_d04260: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
Gene: Gdia_1561: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
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Gene: Magn03009012: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
Gene: amb1564: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
Gene: Rru_A2281: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
*
Rhodospirillum centenum SW Site: position = -168 score = 5.42589 sequence = TGTCGGCAACGCGACA Site: position = -132 score = 5.72945 sequence = TGTCGGATTCCCGACA Gene: RC1_0481: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ |
| CRON 5. | ||||||||||
| modA |
|
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*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -125 score = 3.68256 sequence = TGTCGCCAAGCGGCCC Gene: Gdia_1579: Molybdate ABC transporter,substrate-binding protein |
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Molybdate ABC transporter,substrate-binding protein |
| modB |
|
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Gene: Gdia_1580: Molybdate ABC transporter, permease protein |
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Molybdate ABC transporter, permease protein |
| modC |
|
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Gene: Gdia_1581: Molybdate ABC transporter, ATP-binding protein |
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Molybdate ABC transporter, ATP-binding protein |
| rpoN |
|
Gene: AZL_001090: RNA polymerase sigma-54 factor RpoN |
2
Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0338: RNA polymerase sigma-54 factor RpoN Gene: Gdia_1582: RNA polymerase sigma-54 factor RpoN |
Gene: GOX1842: RNA polymerase sigma-54 factor RpoN |
Gene: GbCGDNIH1_0696: RNA polymerase sigma-54 factor RpoN |
Gene: Magn03009613: RNA polymerase sigma-54 factor RpoN |
Gene: amb3937: RNA polymerase sigma-54 factor RpoN |
Gene: Rru_A0010: RNA polymerase sigma-54 factor RpoN |
Gene: RC1_3203: RNA polymerase sigma-54 factor RpoN |
RNA polymerase sigma-54 factor RpoN |
| CRON 6. | ||||||||||
| iscN |
|
*
Azospirillum sp. B510 Site: position = -188 score = 5.23964 sequence = TGTCGCAAAAGCGACA Gene: AZL_006570: Fe-S cofactor nitrogenase synthesis protein IscN |
*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -115 score = 4.23744 sequence = CGTTGCAAATCGGACA Site: position = -132 score = 5.0772 sequence = CGTCGGGAATCCGACA Gene: Gdia_1560: Fe-S cofactor nitrogenase synthesis protein IscN |
|
|
*
Magnetospirillum magnetotacticum MS-1 Site: position = -126 score = 5.29644 sequence = TGTCGCAAAACCGACA Gene: Magn03009011: Fe-S cofactor nitrogenase synthesis protein IscN |
*
Magnetospirillum magneticum AMB-1 Site: position = -110 score = 4.02074 sequence = TGTCGGATTCCCCTCC Site: position = -127 score = 4.90993 sequence = TGTCGCAAAGTCGACA Gene: amb1563: Fe-S cofactor nitrogenase synthesis protein IscN |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -125 score = 4.91774 sequence = TGTCGGAAAGGCGCCA Site: position = -173 score = 5.51326 sequence = TGTCGGCTTTCCGACA Gene: Rru_A2271: Fe-S cofactor nitrogenase synthesis protein IscN |
*
Rhodospirillum centenum SW Site: position = -122 score = 5.42589 sequence = TGTCGCGTTGCCGACA Site: position = -158 score = 5.72945 sequence = TGTCGGGAATCCGACA Gene: RC1_0480: Fe-S cofactor nitrogenase synthesis protein IscN |
Fe-S cofactor nitrogenase synthesis protein IscN |
| iscU |
|
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Gene: Rru_A2270: Nitrogen fixation protein IscU |
|
Nitrogen fixation protein IscU |
| nifV |
|
Gene: AZL_006540: Homocitrate synthase (EC 2.3.3.14) |
Gene: Gdia_1557: Homocitrate synthase (EC 2.3.3.14) |
|
|
Gene: Magn03009010: Homocitrate synthase (EC 2.3.3.14) |
Gene: amb1562: Homocitrate synthase (EC 2.3.3.14) |
Gene: Rru_A2269: Homocitrate synthase (EC 2.3.3.14) |
*
Rhodospirillum centenum SW Site: position = -155 score = 5.30945 sequence = TGTCGTGAATGCGACA Site: position = -119 score = 5.30945 sequence = TGTCGCATTCACGACA Gene: RC1_3693: Homocitrate synthase (EC 2.3.3.14) |
Homocitrate synthase (EC 2.3.3.14) |
| nifW |
|
Gene: AZL_006520: Nitrogenase-stabilizing/protective protein nifW |
Gene: Gdia_1556: Nitrogenase-stabilizing/protective protein nifW |
|
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Gene: Magn03009009: Nitrogenase-stabilizing/protective protein nifW |
Gene: amb1561: Nitrogenase-stabilizing/protective protein nifW |
Gene: Rru_A2268: Nitrogenase-stabilizing/protective protein nifW |
Gene: RC1_3694: Nitrogenase-stabilizing/protective protein nifW |
Nitrogenase-stabilizing/protective protein nifW |
| fixB |
|
*
Azospirillum sp. B510 Site: position = -177 score = 5.39966 sequence = TGTCGCCTTTGCGACA Site: position = -205 score = 4.64351 sequence = TGTAGCGAAACCGACA Gene: AZL_006470: Electron transfer flavoprotein, beta subunit |
*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -181 score = 4.5611 sequence = TGTCGGAGTTGACACA Gene: Gdia_1555: Electron transfer flavoprotein, beta subunit |
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Gene: Rru_A2267: Electron transfer flavoprotein, beta subunit |
Gene: RC1_3695: Electron transfer flavoprotein, beta subunit |
Electron transfer flavoprotein, beta subunit |
| fixA |
|
Gene: AZL_006480: Electron transfer flavoprotein, alpha subunit |
Gene: Gdia_1554: Electron transfer flavoprotein, alpha subunit |
|
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Gene: Rru_A2266: Electron transfer flavoprotein, alpha subunit |
Gene: RC1_3696: Electron transfer flavoprotein, alpha subunit |
Electron transfer flavoprotein, alpha subunit |
| fixC |
|
Gene: AZL_006490: Electron-transferring-flavoprotein dehydrogenase |
Gene: Gdia_1553: Electron-transferring-flavoprotein dehydrogenase |
|
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Gene: Rru_A2265: Electron-transferring-flavoprotein dehydrogenase |
Gene: RC1_3697: Electron-transferring-flavoprotein dehydrogenase |
Electron-transferring-flavoprotein dehydrogenase |
| fixX |
|
Gene: AZL_006500: Ferredoxin-like protein, FixX |
Gene: Gdia_1552: Ferredoxin-like protein, FixX |
|
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Gene: Rru_A2264: Ferredoxin-like protein, FixX |
Gene: RC1_3698: Ferredoxin-like protein, FixX |
Ferredoxin-like protein, FixX |
| nifU |
|
Gene: AZL_006560: Iron-sulfur cluster assembly scaffold protein NifU |
Gene: Gdia_1559: Iron-sulfur cluster assembly scaffold protein NifU |
|
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Gene: RC1_0479: Iron-sulfur cluster assembly scaffold protein NifU |
Iron-sulfur cluster assembly scaffold protein NifU |
| nifS |
|
Gene: AZL_006550: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
Gene: Gdia_1558: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
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Gene: RC1_0478: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily |
| nifP |
|
Gene: AZL_006530: Serine O-acetyltransferase (EC 2.3.1.30) |
|
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Serine O-acetyltransferase (EC 2.3.1.30) |
| modD |
|
Gene: AZL_026910: Molybdenum transport system protein ModD |
Gene: Gdia_1551: Molybdenum transport system protein ModD |
|
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Gene: Magn03010293: Molybdenum transport system protein ModD |
Gene: amb2953: Molybdenum transport system protein ModD |
Gene: Rru_A1543: Molybdenum transport system protein ModD |
|
Molybdenum transport system protein ModD |
| CRON 7. | ||||||||||
| fer2 |
|
*
Azospirillum sp. B510 Site: position = -214 score = 3.97105 sequence = TGTCCTTTTCCCGACC Gene: AZL_a04200: Ferredoxin, 2Fe-2S (AaFd4) |
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Gene: Magn03007785: Ferredoxin, 2Fe-2S (AaFd4) |
Gene: amb2479: Ferredoxin, 2Fe-2S (AaFd4) |
|
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Ferredoxin, 2Fe-2S (AaFd4) |
| CRON 8. | ||||||||||
| rnfX |
|
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*
Magnetospirillum magnetotacticum MS-1 Site: position = -326 score = 5.23964 sequence = TGTCGCTTTTGCGACA Gene: Magn03008147: Periplasmic protein, probably involved in maturation of Rnf complex |
*
Magnetospirillum magneticum AMB-1 Site: position = -324 score = 4.98106 sequence = TGTCGTACTTGCGACA Gene: amb2611: Periplasmic protein, probably involved in maturation of Rnf complex |
|
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Periplasmic protein, probably involved in maturation of Rnf complex |
| rseC |
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Gene: Magn03008146: Sigma factor RpoE regulatory protein RseC |
Gene: amb2612: Sigma factor RpoE regulatory protein RseC |
|
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Sigma factor RpoE regulatory protein RseC |
| rnfA |
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Gene: Magn03008145: Electron transport complex protein RnfA |
Gene: amb2613: Electron transport complex protein RnfA |
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Electron transport complex protein RnfA |
| rnfB |
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Gene: Magn03008144: Electron transport complex protein RnfB |
Gene: amb2614: Electron transport complex protein RnfB |
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Electron transport complex protein RnfB |
| rnfC |
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Gene: Magn03008143: Electron transport complex protein RnfC |
Gene: amb2615: Electron transport complex protein RnfC |
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Electron transport complex protein RnfC |
| rnfD |
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Gene: Magn03008142: Electron transport complex protein RnfD |
Gene: amb2616: Electron transport complex protein RnfD |
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Electron transport complex protein RnfD |
| rnfG |
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Gene: Magn03008141: Electron transport complex protein RnfG |
Gene: amb2617: Electron transport complex protein RnfG |
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Electron transport complex protein RnfG |
| rnfE |
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Gene: Magn03008140: Electron transport complex protein RnfE |
Gene: amb2618: Electron transport complex protein RnfE |
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Electron transport complex protein RnfE |
| rnfH |
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Gene: Magn03008139: Electron transport complex protein RnfH |
Gene: amb2619: Electron transport complex protein RnfH |
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Electron transport complex protein RnfH |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |