Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NifA - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 54 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acetobacter pasteurianus IFO 3283-01
Azospirillum sp. B510 28 6
Gluconacetobacter diazotrophicus PAl 5 30 5
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1
Magnetospirillum magnetotacticum MS-1 30 6
Magnetospirillum magneticum AMB-1 28 6
Rhodospirillum rubrum ATCC 11170 27 6
Rhodospirillum centenum SW 22 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ahpC
 
Acetobacter pasteurianus IFO 3283-01

Gene: APA01_02050: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1423: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_0680: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 2
Magnetospirillum magnetotacticum MS-1

Gene: Magn03002950: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)

Gene: Magn03011119: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 
Magnetospirillum magneticum AMB-1

Gene: amb0664: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -119
score = 4.35228
sequence = GGTCTGCTACCCGACA

Gene: Rru_A2897: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 
Rhodospirillum centenum SW

Gene: RC1_0439: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
 
CRON 2.
draT
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007730: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -139
score = 4.96037
sequence = TGTGCGGAATCCGACA

Site:
position = -109
score = 4.64413
sequence = TGTTGCAACCCCAACA

Gene: Magn03009023: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)
*
Magnetospirillum magneticum AMB-1

Site:
position = -139
score = 4.96037
sequence = TGTGCGGAATCCGACA

Site:
position = -109
score = 4.64413
sequence = TGTTGCAACCCCAACA

Gene: amb1575: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -182
score = 5.67265
sequence = TGTCGCAAACCCGACA

Site:
position = -152
score = 5.05213
sequence = TGTCGCGGACCCAACA

Gene: Rru_A1009: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)
 
Rhodospirillum centenum SW
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)
draG
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007740: ADP-ribosylglycohydrolase (EC 3.2.-.-)
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009024: ADP-ribosylglycohydrolase (EC 3.2.-.-)
 
Magnetospirillum magneticum AMB-1

Gene: amb1576: ADP-ribosylglycohydrolase (EC 3.2.-.-)
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1008: ADP-ribosylglycohydrolase (EC 3.2.-.-)
 
Rhodospirillum centenum SW
ADP-ribosylglycohydrolase (EC 3.2.-.-)
PF03960
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007750: Nitrogenase-associated protein
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009025: Nitrogenase-associated protein
 
Magnetospirillum magneticum AMB-1

Gene: amb1577: Nitrogenase-associated protein
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1007: Nitrogenase-associated protein
 
Rhodospirillum centenum SW
Nitrogenase-associated protein
 
CRON 3.
nifB
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -190
score = 5.27821
sequence = TGTCGGCACCCCGACA

Site:
position = -139
score = 4.4313
sequence = TGTCACAATGACGACA

Gene: AZL_022470: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -120
score = 4.80076
sequence = TGTCGGACATGAGACA

Gene: Gdia_1576: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -135
score = 4.36909
sequence = TGTCGCATCCCCGCCC

Site:
position = -116
score = 5.49472
sequence = TGTCGGGGATGCGACA

Gene: Magn03009032: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
*
Magnetospirillum magneticum AMB-1

Site:
position = -115
score = 5.49472
sequence = TGTCGGGGATGCGACA

Site:
position = -135
score = 4.87724
sequence = TGTCGCGTCCCCGACC

Gene: amb1583: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -130
score = 4.01944
sequence = TGTCGTAGACTCTACA

Site:
position = -169
score = 4.16267
sequence = TGTCGATATCCCGACC

Gene: Rru_A0994: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
*
Rhodospirillum centenum SW

Site:
position = -157
score = 5.11512
sequence = TGTCGGCTTCCCCACA

Site:
position = -134
score = 5.49472
sequence = TGTCGCATCCCCGACA

Gene: RC1_3690: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
fdxN
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022480: 4Fe-4S ferredoxin, nitrogenase-associated
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1575: 4Fe-4S ferredoxin, nitrogenase-associated
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009031: 4Fe-4S ferredoxin, nitrogenase-associated
 
Magnetospirillum magneticum AMB-1
 2
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2720: 4Fe-4S ferredoxin, nitrogenase-associated

Gene: Rru_A0995: 4Fe-4S ferredoxin, nitrogenase-associated
 
Rhodospirillum centenum SW

Gene: RC1_3689: 4Fe-4S ferredoxin, nitrogenase-associated
4Fe-4S ferredoxin, nitrogenase-associated
AZL_022490
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022490: Hypothetical protein
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Hypothetical protein
PF01816
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022500: Leucine-rich FeS4 cluster domain protein
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1574: Leucine-rich FeS4 cluster domain protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A0996: Leucine-rich FeS4 cluster domain protein
 
Rhodospirillum centenum SW
Leucine-rich FeS4 cluster domain protein
nifZ
 
Acetobacter pasteurianus IFO 3283-01
 2
Azospirillum sp. B510

Gene: AZL_022510: Nitrogen fixation protein NifZ

Gene: AZL_022520: Nitrogen fixation protein NifZ
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1573: Nitrogen fixation protein NifZ
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009030: Nitrogen fixation protein NifZ
 
Magnetospirillum magneticum AMB-1

Gene: amb1582: Nitrogen fixation protein NifZ
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A0997: Nitrogen fixation protein NifZ
 
Rhodospirillum centenum SW

Gene: RC1_3688: Nitrogen fixation protein NifZ
Nitrogen fixation protein NifZ
nifS2
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022530: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
nifT
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022540: Nitrogen fixation protein nifT
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1572: Nitrogen fixation protein nifT
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009029: Nitrogen fixation protein nifT
 
Magnetospirillum magneticum AMB-1

Gene: amb1581: Nitrogen fixation protein nifT
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A0998: Nitrogen fixation protein nifT
 
Rhodospirillum centenum SW

Gene: RC1_3687: Nitrogen fixation protein nifT
Nitrogen fixation protein nifT
sir2
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_022570: Conserved hypothetical protein
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1571: Conserved hypothetical protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009028: Conserved hypothetical protein
 
Magnetospirillum magneticum AMB-1

Gene: amb1580: Conserved hypothetical protein
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A0999: Conserved hypothetical protein
 
Rhodospirillum centenum SW

Gene: RC1_3686: Conserved hypothetical protein
Conserved hypothetical protein
 
CRON 4.
nifH
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -182
score = 5.49439
sequence = TGTCGGGACCCCGACA

Gene: AZL_007710: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -156
score = 3.966
sequence = TGTCAGGCTTCGCACA

Gene: Gdia_1570: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*2
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009021: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH

Site:
position = -193
score = 4.96037
sequence = TGTCGGATTCCGCACA

Site:
position = -223
score = 4.64413
sequence = TGTTGGGGTTGCAACA

Gene: Magn03009022: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
*
Magnetospirillum magneticum AMB-1

Site:
position = -193
score = 4.96037
sequence = TGTCGGATTCCGCACA

Site:
position = -223
score = 4.64413
sequence = TGTTGGGGTTGCAACA

Gene: amb1574: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -192
score = 5.67265
sequence = TGTCGGGTTTGCGACA

Site:
position = -222
score = 5.05213
sequence = TGTTGGGTCCGCGACA

Gene: Rru_A1010: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
*
Rhodospirillum centenum SW

Site:
position = -192
score = 5.61585
sequence = TGTCGCGTTTGCGACA

Gene: RC1_3683: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
nifD
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007700: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1569: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009020: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb1573: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1011: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
 
Rhodospirillum centenum SW

Gene: RC1_3682: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
nifK
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007690: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1568: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009019: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
 
Magnetospirillum magneticum AMB-1

Gene: amb1572: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1012: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
 
Rhodospirillum centenum SW

Gene: RC1_3681: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
nifE
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -123
score = 4.98693
sequence = TGTCGGGTATCGCACA

Site:
position = -150
score = 4.36457
sequence = TGTGCGATACCCTACA

Gene: AZL_007660: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1567: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -118
score = 5.49472
sequence = TGTCGCATCCCCGACA

Gene: Magn03009017: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
*
Magnetospirillum magneticum AMB-1

Site:
position = -118
score = 5.37082
sequence = TGTCGCATGTCCGACA

Gene: amb1569: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -175
score = 5.36625
sequence = TGTCGTAAACCCGACA

Site:
position = -217
score = 4.37345
sequence = TGTCCGGCTTGCGCCA

Gene: Rru_A2286: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
 
Rhodospirillum centenum SW

Gene: RC1_3680: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
nifN
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007650: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1566: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009016: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
 
Magnetospirillum magneticum AMB-1

Gene: amb1568: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2285: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
 
Rhodospirillum centenum SW
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
nifX
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007640: Nitrogenase FeMo-cofactor carrier protein NifX
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1565: Nitrogenase FeMo-cofactor carrier protein NifX
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009015: Nitrogenase FeMo-cofactor carrier protein NifX
 
Magnetospirillum magneticum AMB-1

Gene: amb1567: Nitrogenase FeMo-cofactor carrier protein NifX
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2284: Nitrogenase FeMo-cofactor carrier protein NifX
 
Rhodospirillum centenum SW

Gene: RC1_3679: Nitrogenase FeMo-cofactor carrier protein NifX
Nitrogenase FeMo-cofactor carrier protein NifX
PF03270
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007630: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1564: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009014: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Magnetospirillum magneticum AMB-1

Gene: amb1566: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2283: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Rhodospirillum centenum SW

Gene: RC1_3678: Conserved hypothetical protein, probably related to nitrogen fixation protein
Conserved hypothetical protein, probably related to nitrogen fixation protein
PF05082
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007620: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1563: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010723: Conserved hypothetical protein, probably related to nitrogen fixation protein
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW

Gene: RC1_3677: Conserved hypothetical protein, probably related to nitrogen fixation protein
Conserved hypothetical protein, probably related to nitrogen fixation protein
fdxB
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_007610: Nitrogenase specific ferredoxin III protein FdxB
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1562: Nitrogenase specific ferredoxin III protein FdxB
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009013: Nitrogenase specific ferredoxin III protein FdxB
 
Magnetospirillum magneticum AMB-1

Gene: amb1565: Nitrogenase specific ferredoxin III protein FdxB
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2282: Nitrogenase specific ferredoxin III protein FdxB
 
Rhodospirillum centenum SW

Gene: RC1_0482: Nitrogenase specific ferredoxin III protein FdxB
Nitrogenase specific ferredoxin III protein FdxB
nifQ
 
Acetobacter pasteurianus IFO 3283-01
 2
Azospirillum sp. B510

Gene: AZL_010780: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ

Gene: AZL_d04260: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1561: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009012: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
 
Magnetospirillum magneticum AMB-1

Gene: amb1564: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2281: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
*
Rhodospirillum centenum SW

Site:
position = -168
score = 5.42589
sequence = TGTCGGCAACGCGACA

Site:
position = -132
score = 5.72945
sequence = TGTCGGATTCCCGACA

Gene: RC1_0481: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
 
CRON 5.
modA
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -125
score = 3.68256
sequence = TGTCGCCAAGCGGCCC

Gene: Gdia_1579: Molybdate ABC transporter,substrate-binding protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Molybdate ABC transporter,substrate-binding protein
modB
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1580: Molybdate ABC transporter, permease protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Molybdate ABC transporter, permease protein
modC
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1581: Molybdate ABC transporter, ATP-binding protein
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Molybdate ABC transporter, ATP-binding protein
rpoN
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_001090: RNA polymerase sigma-54 factor RpoN
 2
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0338: RNA polymerase sigma-54 factor RpoN

Gene: Gdia_1582: RNA polymerase sigma-54 factor RpoN
 
Gluconobacter oxydans 621H

Gene: GOX1842: RNA polymerase sigma-54 factor RpoN
 
Granulibacter bethesdensis CGDNIH1

Gene: GbCGDNIH1_0696: RNA polymerase sigma-54 factor RpoN
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009613: RNA polymerase sigma-54 factor RpoN
 
Magnetospirillum magneticum AMB-1

Gene: amb3937: RNA polymerase sigma-54 factor RpoN
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A0010: RNA polymerase sigma-54 factor RpoN
 
Rhodospirillum centenum SW

Gene: RC1_3203: RNA polymerase sigma-54 factor RpoN
RNA polymerase sigma-54 factor RpoN
 
CRON 6.
iscN
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -188
score = 5.23964
sequence = TGTCGCAAAAGCGACA

Gene: AZL_006570: Fe-S cofactor nitrogenase synthesis protein IscN
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -115
score = 4.23744
sequence = CGTTGCAAATCGGACA

Site:
position = -132
score = 5.0772
sequence = CGTCGGGAATCCGACA

Gene: Gdia_1560: Fe-S cofactor nitrogenase synthesis protein IscN
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -126
score = 5.29644
sequence = TGTCGCAAAACCGACA

Gene: Magn03009011: Fe-S cofactor nitrogenase synthesis protein IscN
*
Magnetospirillum magneticum AMB-1

Site:
position = -110
score = 4.02074
sequence = TGTCGGATTCCCCTCC

Site:
position = -127
score = 4.90993
sequence = TGTCGCAAAGTCGACA

Gene: amb1563: Fe-S cofactor nitrogenase synthesis protein IscN
*
Rhodospirillum rubrum ATCC 11170

Site:
position = -125
score = 4.91774
sequence = TGTCGGAAAGGCGCCA

Site:
position = -173
score = 5.51326
sequence = TGTCGGCTTTCCGACA

Gene: Rru_A2271: Fe-S cofactor nitrogenase synthesis protein IscN
*
Rhodospirillum centenum SW

Site:
position = -122
score = 5.42589
sequence = TGTCGCGTTGCCGACA

Site:
position = -158
score = 5.72945
sequence = TGTCGGGAATCCGACA

Gene: RC1_0480: Fe-S cofactor nitrogenase synthesis protein IscN
Fe-S cofactor nitrogenase synthesis protein IscN
iscU
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2270: Nitrogen fixation protein IscU
 
Rhodospirillum centenum SW
Nitrogen fixation protein IscU
nifV
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006540: Homocitrate synthase (EC 2.3.3.14)
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1557: Homocitrate synthase (EC 2.3.3.14)
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009010: Homocitrate synthase (EC 2.3.3.14)
 
Magnetospirillum magneticum AMB-1

Gene: amb1562: Homocitrate synthase (EC 2.3.3.14)
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2269: Homocitrate synthase (EC 2.3.3.14)
*
Rhodospirillum centenum SW

Site:
position = -155
score = 5.30945
sequence = TGTCGTGAATGCGACA

Site:
position = -119
score = 5.30945
sequence = TGTCGCATTCACGACA

Gene: RC1_3693: Homocitrate synthase (EC 2.3.3.14)
Homocitrate synthase (EC 2.3.3.14)
nifW
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006520: Nitrogenase-stabilizing/protective protein nifW
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1556: Nitrogenase-stabilizing/protective protein nifW
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03009009: Nitrogenase-stabilizing/protective protein nifW
 
Magnetospirillum magneticum AMB-1

Gene: amb1561: Nitrogenase-stabilizing/protective protein nifW
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2268: Nitrogenase-stabilizing/protective protein nifW
 
Rhodospirillum centenum SW

Gene: RC1_3694: Nitrogenase-stabilizing/protective protein nifW
Nitrogenase-stabilizing/protective protein nifW
fixB
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -177
score = 5.39966
sequence = TGTCGCCTTTGCGACA

Site:
position = -205
score = 4.64351
sequence = TGTAGCGAAACCGACA

Gene: AZL_006470: Electron transfer flavoprotein, beta subunit
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -181
score = 4.5611
sequence = TGTCGGAGTTGACACA

Gene: Gdia_1555: Electron transfer flavoprotein, beta subunit
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2267: Electron transfer flavoprotein, beta subunit
 
Rhodospirillum centenum SW

Gene: RC1_3695: Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit
fixA
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006480: Electron transfer flavoprotein, alpha subunit
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1554: Electron transfer flavoprotein, alpha subunit
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2266: Electron transfer flavoprotein, alpha subunit
 
Rhodospirillum centenum SW

Gene: RC1_3696: Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit
fixC
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006490: Electron-transferring-flavoprotein dehydrogenase
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1553: Electron-transferring-flavoprotein dehydrogenase
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2265: Electron-transferring-flavoprotein dehydrogenase
 
Rhodospirillum centenum SW

Gene: RC1_3697: Electron-transferring-flavoprotein dehydrogenase
Electron-transferring-flavoprotein dehydrogenase
fixX
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006500: Ferredoxin-like protein, FixX
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1552: Ferredoxin-like protein, FixX
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A2264: Ferredoxin-like protein, FixX
 
Rhodospirillum centenum SW

Gene: RC1_3698: Ferredoxin-like protein, FixX
Ferredoxin-like protein, FixX
nifU
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006560: Iron-sulfur cluster assembly scaffold protein NifU
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1559: Iron-sulfur cluster assembly scaffold protein NifU
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW

Gene: RC1_0479: Iron-sulfur cluster assembly scaffold protein NifU
Iron-sulfur cluster assembly scaffold protein NifU
nifS
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006550: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1558: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW

Gene: RC1_0478: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
nifP
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_006530: Serine O-acetyltransferase (EC 2.3.1.30)
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Serine O-acetyltransferase (EC 2.3.1.30)
modD
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_026910: Molybdenum transport system protein ModD
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1551: Molybdenum transport system protein ModD
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03010293: Molybdenum transport system protein ModD
 
Magnetospirillum magneticum AMB-1

Gene: amb2953: Molybdenum transport system protein ModD
 
Rhodospirillum rubrum ATCC 11170

Gene: Rru_A1543: Molybdenum transport system protein ModD
 
Rhodospirillum centenum SW
Molybdenum transport system protein ModD
 
CRON 7.
fer2
 
Acetobacter pasteurianus IFO 3283-01
*
Azospirillum sp. B510

Site:
position = -214
score = 3.97105
sequence = TGTCCTTTTCCCGACC

Gene: AZL_a04200: Ferredoxin, 2Fe-2S (AaFd4)
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03007785: Ferredoxin, 2Fe-2S (AaFd4)
 
Magnetospirillum magneticum AMB-1

Gene: amb2479: Ferredoxin, 2Fe-2S (AaFd4)
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Ferredoxin, 2Fe-2S (AaFd4)
 
CRON 8.
rnfX
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -326
score = 5.23964
sequence = TGTCGCTTTTGCGACA

Gene: Magn03008147: Periplasmic protein, probably involved in maturation of Rnf complex
*
Magnetospirillum magneticum AMB-1

Site:
position = -324
score = 4.98106
sequence = TGTCGTACTTGCGACA

Gene: amb2611: Periplasmic protein, probably involved in maturation of Rnf complex
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Periplasmic protein, probably involved in maturation of Rnf complex
rseC
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008146: Sigma factor RpoE regulatory protein RseC
 
Magnetospirillum magneticum AMB-1

Gene: amb2612: Sigma factor RpoE regulatory protein RseC
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Sigma factor RpoE regulatory protein RseC
rnfA
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008145: Electron transport complex protein RnfA
 
Magnetospirillum magneticum AMB-1

Gene: amb2613: Electron transport complex protein RnfA
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfA
rnfB
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008144: Electron transport complex protein RnfB
 
Magnetospirillum magneticum AMB-1

Gene: amb2614: Electron transport complex protein RnfB
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfB
rnfC
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008143: Electron transport complex protein RnfC
 
Magnetospirillum magneticum AMB-1

Gene: amb2615: Electron transport complex protein RnfC
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfC
rnfD
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008142: Electron transport complex protein RnfD
 
Magnetospirillum magneticum AMB-1

Gene: amb2616: Electron transport complex protein RnfD
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfD
rnfG
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008141: Electron transport complex protein RnfG
 
Magnetospirillum magneticum AMB-1

Gene: amb2617: Electron transport complex protein RnfG
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfG
rnfE
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008140: Electron transport complex protein RnfE
 
Magnetospirillum magneticum AMB-1

Gene: amb2618: Electron transport complex protein RnfE
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfE
rnfH
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Gluconacetobacter diazotrophicus PAl 5
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
 
Magnetospirillum magnetotacticum MS-1

Gene: Magn03008139: Electron transport complex protein RnfH
 
Magnetospirillum magneticum AMB-1

Gene: amb2619: Electron transport complex protein RnfH
 
Rhodospirillum rubrum ATCC 11170
 
Rhodospirillum centenum SW
Electron transport complex protein RnfH
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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