Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NifA in Rhodospirillales

Properties
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Regulog: NifA - Rhodospirillales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Azospirillum sp. B510
AZL_a04200 fer2 -214 4 TGTCCTTTTCCCGACC
AZL_006470 fixB -177 5.4 TGTCGCCTTTGCGACA
AZL_007710 nifH -182 5.5 TGTCGGGACCCCGACA
AZL_007660 nifE -123 5 TGTCGGGTATCGCACA
AZL_007660 nifE -150 4.4 TGTGCGATACCCTACA
AZL_022470 nifB -190 5.3 TGTCGGCACCCCGACA
AZL_022470 nifB -139 4.4 TGTCACAATGACGACA
AZL_006570 iscN -188 5.2 TGTCGCAAAAGCGACA
AZL_006470 fixB -205 4.6 TGTAGCGAAACCGACA
Gluconacetobacter diazotrophicus PAl 5
Gdia_1570 nifH -156 4 TGTCAGGCTTCGCACA
Gdia_1555 fixB -181 4.6 TGTCGGAGTTGACACA
Gdia_1560 iscN -115 4.2 CGTTGCAAATCGGACA
Gdia_1576 nifB -120 4.8 TGTCGGACATGAGACA
Gdia_1560 iscN -132 5.1 CGTCGGGAATCCGACA
Gdia_1579 modA -125 3.7 TGTCGCCAAGCGGCCC
Magnetospirillum magnetotacticum MS-1
Magn03009032 nifB -135 4.4 TGTCGCATCCCCGCCC
Magn03009032 nifB -116 5.5 TGTCGGGGATGCGACA
Magn03009023 draT -139 5 TGTGCGGAATCCGACA
Magn03009023 draT -109 4.6 TGTTGCAACCCCAACA
Magn03009022 nifH -193 5 TGTCGGATTCCGCACA
Magn03009011 iscN -126 5.3 TGTCGCAAAACCGACA
Magn03009017 nifE -118 5.5 TGTCGCATCCCCGACA
Magn03008147 rnfX -326 5.2 TGTCGCTTTTGCGACA
Magn03009022 nifH -223 4.6 TGTTGGGGTTGCAACA
Magnetospirillum magneticum AMB-1
amb1583 nifB -115 5.5 TGTCGGGGATGCGACA
amb1575 draT -139 5 TGTGCGGAATCCGACA
amb1575 draT -109 4.6 TGTTGCAACCCCAACA
amb1563 iscN -110 4 TGTCGGATTCCCCTCC
amb2611 rnfX -324 5 TGTCGTACTTGCGACA
amb1583 nifB -135 4.9 TGTCGCGTCCCCGACC
amb1569 nifE -118 5.4 TGTCGCATGTCCGACA
amb1574 nifH -193 5 TGTCGGATTCCGCACA
amb1574 nifH -223 4.6 TGTTGGGGTTGCAACA
amb1563 iscN -127 4.9 TGTCGCAAAGTCGACA
Rhodospirillum rubrum ATCC 11170
Rru_A2271 iscN -125 4.9 TGTCGGAAAGGCGCCA
Rru_A1009 draT -182 5.7 TGTCGCAAACCCGACA
Rru_A1009 draT -152 5.1 TGTCGCGGACCCAACA
Rru_A2897 ahpC -119 4.4 GGTCTGCTACCCGACA
Rru_A2271 iscN -173 5.5 TGTCGGCTTTCCGACA
Rru_A0994 nifB -130 4 TGTCGTAGACTCTACA
Rru_A0994 nifB -169 4.2 TGTCGATATCCCGACC
Rru_A1010 nifH -192 5.7 TGTCGGGTTTGCGACA
Rru_A1010 nifH -222 5.1 TGTTGGGTCCGCGACA
Rru_A2286 nifE -175 5.4 TGTCGTAAACCCGACA
Rru_A2286 nifE -217 4.4 TGTCCGGCTTGCGCCA
Rhodospirillum centenum SW
RC1_3693 nifV -155 5.3 TGTCGTGAATGCGACA
RC1_0480 iscN -122 5.4 TGTCGCGTTGCCGACA
RC1_0480 iscN -158 5.7 TGTCGGGAATCCGACA
RC1_3693 nifV -119 5.3 TGTCGCATTCACGACA
RC1_3690 nifB -157 5.1 TGTCGGCTTCCCCACA
RC1_0481 nifQ -168 5.4 TGTCGGCAACGCGACA
RC1_0481 nifQ -132 5.7 TGTCGGATTCCCGACA
RC1_3690 nifB -134 5.5 TGTCGCATCCCCGACA
RC1_3683 nifH -192 5.6 TGTCGCGTTTGCGACA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise