Profile of regulator NifA in Rhodospirillales
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | Nitrogen fixation |
| Effector: | |
| Regulog: | NifA - Rhodospirillales |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - NifA
- By TF family - Fis
- By pathway - Nitrogen fixation
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Azospirillum sp. B510 | |||||
| AZL_a04200 | fer2 | -214 | 4 | TGTCCTTTTCCCGACC | |
| AZL_006470 | fixB | -177 | 5.4 | TGTCGCCTTTGCGACA | |
| AZL_007710 | nifH | -182 | 5.5 | TGTCGGGACCCCGACA | |
| AZL_007660 | nifE | -123 | 5 | TGTCGGGTATCGCACA | |
| AZL_007660 | nifE | -150 | 4.4 | TGTGCGATACCCTACA | |
| AZL_022470 | nifB | -190 | 5.3 | TGTCGGCACCCCGACA | |
| AZL_022470 | nifB | -139 | 4.4 | TGTCACAATGACGACA | |
| AZL_006570 | iscN | -188 | 5.2 | TGTCGCAAAAGCGACA | |
| AZL_006470 | fixB | -205 | 4.6 | TGTAGCGAAACCGACA | |
| Gluconacetobacter diazotrophicus PAl 5 | |||||
| Gdia_1570 | nifH | -156 | 4 | TGTCAGGCTTCGCACA | |
| Gdia_1555 | fixB | -181 | 4.6 | TGTCGGAGTTGACACA | |
| Gdia_1560 | iscN | -115 | 4.2 | CGTTGCAAATCGGACA | |
| Gdia_1576 | nifB | -120 | 4.8 | TGTCGGACATGAGACA | |
| Gdia_1560 | iscN | -132 | 5.1 | CGTCGGGAATCCGACA | |
| Gdia_1579 | modA | -125 | 3.7 | TGTCGCCAAGCGGCCC | |
| Magnetospirillum magnetotacticum MS-1 | |||||
| Magn03009032 | nifB | -135 | 4.4 | TGTCGCATCCCCGCCC | |
| Magn03009032 | nifB | -116 | 5.5 | TGTCGGGGATGCGACA | |
| Magn03009023 | draT | -139 | 5 | TGTGCGGAATCCGACA | |
| Magn03009023 | draT | -109 | 4.6 | TGTTGCAACCCCAACA | |
| Magn03009022 | nifH | -193 | 5 | TGTCGGATTCCGCACA | |
| Magn03009011 | iscN | -126 | 5.3 | TGTCGCAAAACCGACA | |
| Magn03009017 | nifE | -118 | 5.5 | TGTCGCATCCCCGACA | |
| Magn03008147 | rnfX | -326 | 5.2 | TGTCGCTTTTGCGACA | |
| Magn03009022 | nifH | -223 | 4.6 | TGTTGGGGTTGCAACA | |
| Magnetospirillum magneticum AMB-1 | |||||
| amb1583 | nifB | -115 | 5.5 | TGTCGGGGATGCGACA | |
| amb1575 | draT | -139 | 5 | TGTGCGGAATCCGACA | |
| amb1575 | draT | -109 | 4.6 | TGTTGCAACCCCAACA | |
| amb1563 | iscN | -110 | 4 | TGTCGGATTCCCCTCC | |
| amb2611 | rnfX | -324 | 5 | TGTCGTACTTGCGACA | |
| amb1583 | nifB | -135 | 4.9 | TGTCGCGTCCCCGACC | |
| amb1569 | nifE | -118 | 5.4 | TGTCGCATGTCCGACA | |
| amb1574 | nifH | -193 | 5 | TGTCGGATTCCGCACA | |
| amb1574 | nifH | -223 | 4.6 | TGTTGGGGTTGCAACA | |
| amb1563 | iscN | -127 | 4.9 | TGTCGCAAAGTCGACA | |
| Rhodospirillum rubrum ATCC 11170 | |||||
| Rru_A2271 | iscN | -125 | 4.9 | TGTCGGAAAGGCGCCA | |
| Rru_A1009 | draT | -182 | 5.7 | TGTCGCAAACCCGACA | |
| Rru_A1009 | draT | -152 | 5.1 | TGTCGCGGACCCAACA | |
| Rru_A2897 | ahpC | -119 | 4.4 | GGTCTGCTACCCGACA | |
| Rru_A2271 | iscN | -173 | 5.5 | TGTCGGCTTTCCGACA | |
| Rru_A0994 | nifB | -130 | 4 | TGTCGTAGACTCTACA | |
| Rru_A0994 | nifB | -169 | 4.2 | TGTCGATATCCCGACC | |
| Rru_A1010 | nifH | -192 | 5.7 | TGTCGGGTTTGCGACA | |
| Rru_A1010 | nifH | -222 | 5.1 | TGTTGGGTCCGCGACA | |
| Rru_A2286 | nifE | -175 | 5.4 | TGTCGTAAACCCGACA | |
| Rru_A2286 | nifE | -217 | 4.4 | TGTCCGGCTTGCGCCA | |
| Rhodospirillum centenum SW | |||||
| RC1_3693 | nifV | -155 | 5.3 | TGTCGTGAATGCGACA | |
| RC1_0480 | iscN | -122 | 5.4 | TGTCGCGTTGCCGACA | |
| RC1_0480 | iscN | -158 | 5.7 | TGTCGGGAATCCGACA | |
| RC1_3693 | nifV | -119 | 5.3 | TGTCGCATTCACGACA | |
| RC1_3690 | nifB | -157 | 5.1 | TGTCGGCTTCCCCACA | |
| RC1_0481 | nifQ | -168 | 5.4 | TGTCGGCAACGCGACA | |
| RC1_0481 | nifQ | -132 | 5.7 | TGTCGGATTCCCGACA | |
| RC1_3690 | nifB | -134 | 5.5 | TGTCGCATCCCCGACA | |
| RC1_3683 | nifH | -192 | 5.6 | TGTCGCGTTTGCGACA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |