Regulon of NifA in Gluconacetobacter diazotrophicus PAl 5

Properties
Regulator type:	Transcription factor
TF locus tag:	Gdia_1577
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Regulog:	NifA - Rhodospirillales
Statistics of regulated genes:
- Genes	30
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 54 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - NifA
By TF family - Fis
By pathway - Nitrogen fixation

Regulated operons
	Locus Tag	Name	Function
Position: -120 Score: 4.8 Sequence: TGTCGGACATGAGACA Locus tag: Gdia_1576 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Gdia_1575 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: Gdia_1574 Name: PF01816 Funciton: Leucine-rich FeS4 cluster domain protein Locus tag: Gdia_1573 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: Gdia_1572 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: Gdia_1571 Name: sir2 Funciton: Conserved hypothetical protein
	Gdia_1576	nifB	Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
	Gdia_1575	fdxN	4Fe-4S ferredoxin, nitrogenase-associated
	Gdia_1574	PF01816	Leucine-rich FeS4 cluster domain protein
	Gdia_1573	nifZ	Nitrogen fixation protein NifZ
	Gdia_1572	nifT	Nitrogen fixation protein nifT
	Gdia_1571	sir2	Conserved hypothetical protein
Position: -132 Score: 5.1 Sequence: CGTCGGGAATCCGACA Position: -115 Score: 4.2 Sequence: CGTTGCAAATCGGACA Locus tag: Gdia_1560 Name: iscN Funciton: Fe-S cofactor nitrogenase synthesis protein IscN Locus tag: Gdia_1559 Name: nifU Funciton: Iron-sulfur cluster assembly scaffold protein NifU Locus tag: Gdia_1558 Name: nifS Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily Locus tag: Gdia_1557 Name: nifV Funciton: Homocitrate synthase (EC 2.3.3.14) Locus tag: Gdia_1556 Name: nifW Funciton: Nitrogenase-stabilizing/protective protein nifW
	Gdia_1560	iscN	Fe-S cofactor nitrogenase synthesis protein IscN
	Gdia_1559	nifU	Iron-sulfur cluster assembly scaffold protein NifU
	Gdia_1558	nifS	Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
	Gdia_1557	nifV	Homocitrate synthase (EC 2.3.3.14)
	Gdia_1556	nifW	Nitrogenase-stabilizing/protective protein nifW
Position: -156 Score: 4 Sequence: TGTCAGGCTTCGCACA Locus tag: Gdia_1570 Name: nifH Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH Locus tag: Gdia_1569 Name: nifD Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Locus tag: Gdia_1568 Name: nifK Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) Locus tag: Gdia_1567 Name: nifE Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE Locus tag: Gdia_1566 Name: nifN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN Locus tag: Gdia_1565 Name: nifX Funciton: Nitrogenase FeMo-cofactor carrier protein NifX Locus tag: Gdia_1564 Name: PF03270 Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein Locus tag: Gdia_1563 Name: PF05082 Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein Locus tag: Gdia_1562 Name: fdxB Funciton: Nitrogenase specific ferredoxin III protein FdxB Locus tag: Gdia_1561 Name: nifQ Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
	Gdia_1570	nifH	Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
	Gdia_1569	nifD	Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
	Gdia_1568	nifK	Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
	Gdia_1567	nifE	Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
	Gdia_1566	nifN	Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
	Gdia_1565	nifX	Nitrogenase FeMo-cofactor carrier protein NifX
	Gdia_1564	PF03270	Conserved hypothetical protein, probably related to nitrogen fixation protein
	Gdia_1563	PF05082	Conserved hypothetical protein, probably related to nitrogen fixation protein
	Gdia_1562	fdxB	Nitrogenase specific ferredoxin III protein FdxB
	Gdia_1561	nifQ	Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
Position: -125 Score: 3.7 Sequence: TGTCGCCAAGCGGCCC Locus tag: Gdia_1579 Name: modA Funciton: Molybdate ABC transporter,substrate-binding protein Locus tag: Gdia_1580 Name: modB Funciton: Molybdate ABC transporter, permease protein Locus tag: Gdia_1581 Name: modC Funciton: Molybdate ABC transporter, ATP-binding protein Locus tag: Gdia_1582 Name: rpoN Funciton: RNA polymerase sigma-54 factor RpoN
	Gdia_1579	modA	Molybdate ABC transporter,substrate-binding protein
	Gdia_1580	modB	Molybdate ABC transporter, permease protein
	Gdia_1581	modC	Molybdate ABC transporter, ATP-binding protein
	Gdia_1582	rpoN	RNA polymerase sigma-54 factor RpoN
Position: -181 Score: 4.6 Sequence: TGTCGGAGTTGACACA Locus tag: Gdia_1555 Name: fixB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Gdia_1554 Name: fixA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Gdia_1553 Name: fixC Funciton: Electron-transferring-flavoprotein dehydrogenase Locus tag: Gdia_1552 Name: fixX Funciton: Ferredoxin-like protein, FixX Locus tag: Gdia_1551 Name: modD Funciton: Molybdenum transport system protein ModD
	Gdia_1555	fixB	Electron transfer flavoprotein, beta subunit
	Gdia_1554	fixA	Electron transfer flavoprotein, alpha subunit
	Gdia_1553	fixC	Electron-transferring-flavoprotein dehydrogenase
	Gdia_1552	fixX	Ferredoxin-like protein, FixX
	Gdia_1551	modD	Molybdenum transport system protein ModD

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NifA in Gluconacetobacter diazotrophicus PAl 5

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --