Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NifA in Rhodospirillum centenum SW

Properties
Regulator type: Transcription factor
TF locus tag: RC1_3691
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Regulog: NifA - Rhodospirillales
Statistics of regulated genes:
- Genes 22
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 54 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -157
Score: 5.1
Sequence: TGTCGGCTTCCCCACA
Position: -134
Score: 5.5
Sequence: TGTCGCATCCCCGACA
Locus tag: RC1_3690
Name: nifB
Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: RC1_3689
Name: fdxN
Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
Locus tag: RC1_3688
Name: nifZ
Funciton: Nitrogen fixation protein NifZ
Locus tag: RC1_3687
Name: nifT
Funciton: Nitrogen fixation protein nifT
Locus tag: RC1_3686
Name: sir2
Funciton: Conserved hypothetical protein
RC1_3690
nifB
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
RC1_3689
fdxN
4Fe-4S ferredoxin, nitrogenase-associated
RC1_3688
nifZ
Nitrogen fixation protein NifZ
RC1_3687
nifT
Nitrogen fixation protein nifT
RC1_3686
sir2
Conserved hypothetical protein
Position: -158
Score: 5.7
Sequence: TGTCGGGAATCCGACA
Position: -122
Score: 5.4
Sequence: TGTCGCGTTGCCGACA
Locus tag: RC1_0480
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: RC1_0479
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: RC1_0478
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
RC1_0480
iscN
Fe-S cofactor nitrogenase synthesis protein IscN
RC1_0479
nifU
Iron-sulfur cluster assembly scaffold protein NifU
RC1_0478
nifS
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Position: -155
Score: 5.3
Sequence: TGTCGTGAATGCGACA
Position: -119
Score: 5.3
Sequence: TGTCGCATTCACGACA
Locus tag: RC1_3693
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: RC1_3694
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
Locus tag: RC1_3695
Name: fixB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: RC1_3696
Name: fixA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: RC1_3697
Name: fixC
Funciton: Electron-transferring-flavoprotein dehydrogenase
Locus tag: RC1_3698
Name: fixX
Funciton: Ferredoxin-like protein, FixX
RC1_3693
nifV
Homocitrate synthase (EC 2.3.3.14)
RC1_3694
nifW
Nitrogenase-stabilizing/protective protein nifW
RC1_3695
fixB
Electron transfer flavoprotein, beta subunit
RC1_3696
fixA
Electron transfer flavoprotein, alpha subunit
RC1_3697
fixC
Electron-transferring-flavoprotein dehydrogenase
RC1_3698
fixX
Ferredoxin-like protein, FixX
Position: -192
Score: 5.6
Sequence: TGTCGCGTTTGCGACA
Locus tag: RC1_3683
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: RC1_3682
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: RC1_3681
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: RC1_3680
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: RC1_3679
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: RC1_3678
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: RC1_3677
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
RC1_3683
nifH
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
RC1_3682
nifD
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
RC1_3681
nifK
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
RC1_3680
nifE
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
RC1_3679
nifX
Nitrogenase FeMo-cofactor carrier protein NifX
RC1_3678
PF03270
Conserved hypothetical protein, probably related to nitrogen fixation protein
RC1_3677
PF05082
Conserved hypothetical protein, probably related to nitrogen fixation protein
Position: -168
Score: 5.4
Sequence: TGTCGGCAACGCGACA
Position: -132
Score: 5.7
Sequence: TGTCGGATTCCCGACA
Locus tag: RC1_0481
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
RC1_0481
nifQ
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
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