Regulog TyrR - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | TyrR |
| Regulation mode: | activator (repressor) |
| Biological process: | Aromatic amino acid metabolism |
| Effector: | Tyrosine; Phenylalanine |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TyrR
- By taxonomy - Vibrionales
- By TF family - TyrR
- By effector - Tyrosine
- By effector - Phenylalanine
- By pathway - Aromatic amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Photobacterium profundum SS9 | 11 | 6 |
| Vibrio angustum S14 | 12 | 7 |
| Vibrio cholerae O1 biovar eltor str. N16961 | 11 | 6 |
| Vibrio fischeri ES114 | 5 | 4 |
| Vibrio harveyi ATCC BAA-1116 | 11 | 6 |
| Vibrio parahaemolyticus RIMD 2210633 | 12 | 7 |
| Vibrio salmonicida LFI1238 | 5 | 4 |
| Vibrio shilonii AK1 | 13 | 8 |
| Vibrio splendidus LGP32 | 13 | 8 |
| Vibrio vulnificus CMCP6 | 13 | 8 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| tyrR |
Gene: PBPRA2434: Transcriptional regulator of aromatic amino acid biosynthesis |
*
Vibrio angustum S14 Site: position = -147 score = 4.60277 sequence = GTGTAAACTCATATTAATAC Gene: VAS14_00826: Transcriptional regulator of aromatic amino acid biosynthesis |
Gene: VC1308: Transcriptional regulator of aromatic amino acid biosynthesis |
*
Vibrio fischeri ES114 Site: position = -41 score = 5.61476 sequence = GTGTAAACATATTTTGACAC Gene: VF_A0751: Transcriptional regulator of aromatic amino acid biosynthesis |
Gene: VIBHAR_01919: Transcriptional regulator of aromatic amino acid biosynthesis |
Gene: VP1869: Transcriptional regulator of aromatic amino acid biosynthesis |
*
Vibrio salmonicida LFI1238 Site: position = -41 score = 5.16865 sequence = CTGTAAACATATTGTGACAC Gene: VSAL_II0864: Transcriptional regulator of aromatic amino acid biosynthesis |
Gene: VSAK1_01477: Transcriptional regulator of aromatic amino acid biosynthesis |
*
Vibrio splendidus LGP32 Site: position = -93 score = 4.91318 sequence = GAGTAAACATATGTTTACTC Gene: VS_1793: Transcriptional regulator of aromatic amino acid biosynthesis |
Gene: VV1_2270: Transcriptional regulator of aromatic amino acid biosynthesis |
Transcriptional regulator of aromatic amino acid biosynthesis |
| CRON 2. | |||||||||||
| aroG |
Gene: PBPRB1262: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
Gene: VAS14_10584: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
|
Gene: VF_A0394: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
Gene: VIBHAR_06261: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -222 score = 5.43218 sequence = GTGTAAATATTATTTTACGA Gene: VPA1185: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
Gene: VSAL_II0448: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
Gene: VSAK1_14652: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
*
Vibrio splendidus LGP32 Site: position = -190 score = 5.13493 sequence = GTGTAAATAATGTTATACGG Gene: VS_II0387: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
*
Vibrio vulnificus CMCP6 Site: position = -184 score = 5.3662 sequence = GTGTAATTATTTTTTTACAT Gene: VV20558: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) |
| CRON 3. | |||||||||||
| COG0733 |
*
Photobacterium profundum SS9 Site: position = -74 score = 5.37806 sequence = CTGTACATAATAGTTTACAG Gene: PBPRA2512: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio angustum S14 Site: position = -243 score = 4.79539 sequence = GTGTAAACCTTAAATAACAC Gene: VAS14_13304: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -50 score = 5.72507 sequence = GTGTAATTTTATTTTTACAC Gene: VC1669: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio fischeri ES114 Site: position = -78 score = 5.16449 sequence = ATGTACAAAAATATGTACAC Gene: VF_1605: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -136 score = 5.90136 sequence = GTGTACATTAATATTTACAC Gene: VIBHAR_02692: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -80 score = 6.01372 sequence = GTGTATATAAATATTTACAC Gene: VP1184: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio salmonicida LFI1238 Site: position = -52 score = 5.61488 sequence = ATGTAAAATATAATTTACAA Gene: VSAL_I1935: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*2
Vibrio shilonii AK1 Site: position = -136 score = 5.23956 sequence = GTGTATAAAAATAAATACAC Gene: VSAK1_16422: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family Site: position = -154 score = 5.89263 sequence = GTGTAAACTAAAGATTACAC Gene: VSAK1_01272: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio splendidus LGP32 Site: position = -87 score = 5.86814 sequence = GTGTAAATTATTATATACAC Gene: VS_1980: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
*
Vibrio vulnificus CMCP6 Site: position = -82 score = 5.32506 sequence = GTGTAAAAAATTTTGTACAT Gene: VV1_2869: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
| CRON 4. | |||||||||||
| aroF |
*
Photobacterium profundum SS9 Site: position = -171 score = 5.19403 sequence = GTGTAAACTTAAGTTTACGA Gene: PBPRA3026: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio angustum S14 Site: position = -161 score = 6.10089 sequence = CTGTAAATAATTATTTACAG Gene: VAS14_20611: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -28 score = 6.25296 sequence = GTGTAAATAATAAATTACAG Site: position = -135 score = 5.39538 sequence = GTGTAATTTTTAATTTACAT Gene: VC0695: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio fischeri ES114 Site: position = -29 score = 5.78567 sequence = ATGGAAATAAAAGTTTACAG Site: position = -139 score = 5.08858 sequence = CTGTAAACTTAAATTTACGA Gene: VF_0553: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -29 score = 5.99042 sequence = GTGTAAACATAAATATACAG Site: position = -139 score = 6.41548 sequence = ATGTAAATTAAAATTTACAC Gene: VIBHAR_00992: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -29 score = 6.04794 sequence = GTGTAAAAATAAATATACAG Site: position = -139 score = 6.52573 sequence = GTGTAAATTAATATTTACAG Gene: VP0546: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio salmonicida LFI1238 Site: position = -137 score = 5.08858 sequence = TTGTAAATTTAAGTTTACGA Site: position = -28 score = 5.2079 sequence = ATGGACATAAAAGTTTACAG Gene: VSAL_I0653: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio shilonii AK1 Site: position = -28 score = 6.37222 sequence = GTGTAAAATAATATTTACAG Site: position = -141 score = 5.96273 sequence = GTGTAAAATTATATTTACAT Gene: VSAK1_14082: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio splendidus LGP32 Site: position = -135 score = 6.2217 sequence = GTGTAAACTTAAATTTACAC Site: position = -28 score = 6.04794 sequence = GTGTAAAAATAAATATACAG Gene: VS_0547: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Vibrio vulnificus CMCP6 Site: position = -30 score = 5.93959 sequence = GTGTAAAAAATAATATACAG Site: position = -137 score = 5.61672 sequence = GTGTAATTTATTTTTTACAC Gene: VV1_0495: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
| tyrA |
Gene: PBPRA3025: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VAS14_20616: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VC0696: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VF_0554: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VIBHAR_00993: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VP0547: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VSAL_I0654: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VSAK1_14087: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VS_0548: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Gene: VV1_0494: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
| CRON 5. | |||||||||||
| hpd |
Gene: PBPRB1180: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
Gene: VAS14_13434: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -256 score = 4.77228 sequence = AAGTAACAATATTGTTACAT Site: position = -86 score = 4.72045 sequence = ATGTAATAAAATTGTTACCT Gene: VC1344: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
|
*
Vibrio harveyi ATCC BAA-1116 Site: position = -147 score = 5.1829 sequence = CTGTAACATAAATTTTACAA Gene: VIBHAR_02177: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -154 score = 5.56288 sequence = GTGTAACATTAATTTTACAT Gene: VP1349: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
|
*
Vibrio shilonii AK1 Site: position = -169 score = 4.77477 sequence = ATGTAGCAAAAATGTTACAA Gene: VSAK1_19029: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
*
Vibrio splendidus LGP32 Site: position = -146 score = 5.39104 sequence = GTGTAACAAATATTTTACAA Gene: VS_II1521: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
*
Vibrio vulnificus CMCP6 Site: position = -252 score = 4.59528 sequence = GGTTAACATAAAATTTACAT Site: position = -137 score = 4.67713 sequence = GTGTAACAAATGCTTTACAT Gene: VV1_2768: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
| hmgA |
*
Photobacterium profundum SS9 Site: position = -321 score = 5.67525 sequence = GTGTAACATAAATTTTACAT Site: position = -164 score = 4.30387 sequence = ATGTAAAATATTCAACACAC Gene: PBPRB1165: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
*
Vibrio angustum S14 Site: position = -109 score = 4.19535 sequence = TTGTAAACAAGAATGAACAT Gene: VAS14_11214: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
Gene: VC1345: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
|
Gene: VIBHAR_02178: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
Gene: VP1350: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
|
Gene: VSAK1_19034: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
Gene: VS_II1520: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
Gene: VV1_2767: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
| hmgC |
Gene: PBPRB1166: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: VAS14_11209: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: VC1346: Fumarylacetoacetase (EC 3.7.1.2) |
|
Gene: VIBHAR_02179: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: VP1351: Fumarylacetoacetase (EC 3.7.1.2) |
|
Gene: VSAK1_19039: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: VS_II1519: Fumarylacetoacetase (EC 3.7.1.2) |
Gene: VV1_2766: Fumarylacetoacetase (EC 3.7.1.2) |
Fumarylacetoacetase (EC 3.7.1.2) |
| hmgB |
Gene: PBPRB1167: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: VAS14_11204: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: VC1347: Maleylacetoacetate isomerase (EC 5.2.1.2) |
|
Gene: VIBHAR_02180: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: VP1352: Maleylacetoacetate isomerase (EC 5.2.1.2) |
|
Gene: VSAK1_19044: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: VS_II1518: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Gene: VV1_2765: Maleylacetoacetate isomerase (EC 5.2.1.2) |
Maleylacetoacetate isomerase (EC 5.2.1.2) |
| acsA |
Gene: PBPRB1168: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
Gene: VAS14_11199: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -144 score = 5.36978 sequence = ATGTAACAATAATTTTACAA Gene: VCA0829: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
|
*
Vibrio harveyi ATCC BAA-1116 Site: position = -130 score = 4.87876 sequence = GTGTAACATTTTCTTTACAT Gene: VIBHAR_05420: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -130 score = 5.12347 sequence = ATGTAACATATTGTTTACAT Gene: VPA0575: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
|
*
Vibrio shilonii AK1 Site: position = -136 score = 5.46411 sequence = GTGTAACAATTTATTTACAT Gene: VSAK1_21594: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
*
Vibrio splendidus LGP32 Site: position = -112 score = 5.60226 sequence = GTGTAACATTTTATTTACAC Gene: VS_II1510: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
*
Vibrio vulnificus CMCP6 Site: position = -135 score = 4.70291 sequence = GTGTAACATTTTCTTTACAA Gene: VV2_0456: Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
Acetoacetyl-CoA synthetase (EC 6.2.1.16) |
| CRON 6. | |||||||||||
| phhA |
*
Photobacterium profundum SS9 Site: position = -243 score = 5.7237 sequence = ATGTAAAATTTATGTTACAC Gene: PBPRB1164: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
*
Vibrio angustum S14 Site: position = -182 score = 3.82606 sequence = ATGTTCATTCTTGTTTACAA Gene: VAS14_11219: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -34 score = 5.44106 sequence = TTGTAAAATTATTGTTACAT Gene: VCA0828: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
|
*
Vibrio harveyi ATCC BAA-1116 Site: position = -111 score = 6.11164 sequence = ATGTAAAGAAAATGTTACAC Gene: VIBHAR_05421: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -111 score = 5.6404 sequence = ATGTAAACAATATGTTACAT Gene: VPA0576: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
|
*
Vibrio shilonii AK1 Site: position = -109 score = 6.2567 sequence = ATGTAAATAAATTGTTACAC Gene: VSAK1_21599: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
*
Vibrio splendidus LGP32 Site: position = -107 score = 6.45229 sequence = GTGTAAATAAAATGTTACAC Gene: VS_II1509: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
*
Vibrio vulnificus CMCP6 Site: position = -111 score = 5.92476 sequence = TTGTAAAGAAAATGTTACAC Gene: VV20455: Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
Phenylalanine-4-hydroxylase (EC 1.14.16.1) |
| phhB |
Gene: PBPRB1163: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Gene: VAS14_11224: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Gene: VCA0827: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
|
Gene: VIBHAR_05422: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Gene: VPA0577: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
|
Gene: VSAK1_21604: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Gene: VS_II1508: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Gene: VV20454: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) |
| CRON 7. | |||||||||||
| COG1284 |
*
Photobacterium profundum SS9 Site: position = -106 score = 5.6516 sequence = ATGTAAAAAAATCATTACAG Gene: PBPRA0794: Conserved hypothetical protein |
*
Vibrio angustum S14 Site: position = -106 score = 6.02388 sequence = GTGTAAAAAATATATTACAG Gene: VAS14_16576: Conserved hypothetical protein |
Gene: VC0940: Conserved hypothetical protein |
Gene: VF_0694: Conserved hypothetical protein |
Gene: VIBHAR_01207: Conserved hypothetical protein |
Gene: VP0714: Conserved hypothetical protein |
Gene: VSAL_I0865: Conserved hypothetical protein |
*
Vibrio shilonii AK1 Site: position = -111 score = 5.08524 sequence = GTGTAAAATTTGAATTACAT Gene: VSAK1_10508: Conserved hypothetical protein |
Gene: VS_2374: Conserved hypothetical protein |
*
Vibrio vulnificus CMCP6 Site: position = -112 score = 4.70442 sequence = CTGTAAAACAACAATTACAT Gene: VV1_0287: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 8. | |||||||||||
| tyrP |
*
Photobacterium profundum SS9 Site: position = -224 score = 5.95394 sequence = ATGTAAATATAAGTTTACAT Site: position = -37 score = 4.5406 sequence = GTGTAAAGTTTTATGAACAT Gene: PBPRA2465: tyrosine-specific transport protein |
*
Vibrio angustum S14 Site: position = -312 score = 5.5872 sequence = ACGTAAATATAAATTTACAT Site: position = -125 score = 5.92656 sequence = ATGTAACTAAAAGTTTACAC Gene: VAS14_18444: tyrosine-specific transport protein |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -20 score = 5.04535 sequence = ATGTATAAAAGAGTTTACAC Site: position = -168 score = 6.07461 sequence = GTGTAAATTATTAATTACAG Gene: VCA0772: tyrosine-specific transport protein |
*
Vibrio fischeri ES114 Site: position = -132 score = 6.0843 sequence = GTGTAAACATATAATTACAG Gene: VF_1197: tyrosine-specific transport protein |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -287 score = 5.49443 sequence = GTGTATAAAATAGTTTACAC Site: position = -139 score = 5.20094 sequence = CTGTAAAGATAAATATACAA Gene: VIBHAR_02530: tyrosine-specific transport protein |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -167 score = 6.12589 sequence = GTGTAAATATAATTTTACGG Site: position = -19 score = 5.38782 sequence = ATGTAAAGATAAATATACAA Gene: VP1426: tyrosine-specific transport protein |
*
Vibrio salmonicida LFI1238 Site: position = -117 score = 5.29795 sequence = TTGTAATAATAAGTTTACAC Gene: VSAL_I1774: tyrosine-specific transport protein |
*
Vibrio shilonii AK1 Site: position = -144 score = 4.62006 sequence = AGATAAATTTATGTTTACAT Site: position = -165 score = 5.05224 sequence = CTGTAAACACACTTTTACAC Gene: VSAK1_15307: tyrosine-specific transport protein |
*
Vibrio splendidus LGP32 Site: position = -163 score = 5.08647 sequence = CTGTACATATTAATATACAG Site: position = -144 score = 4.50959 sequence = GTGGATATTTTTAATTACAT Gene: VS_II0802: tyrosine-specific transport protein |
*
Vibrio vulnificus CMCP6 Site: position = -169 score = 4.92431 sequence = GTGTATTATTAAGTTTACAC Site: position = -21 score = 4.81915 sequence = CCGTAAATATAAGAATACAC Gene: VV1_2293: tyrosine-specific transport protein |
tyrosine-specific transport protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |