Regulog HrcA - Listeriaceae

Member of regulog collections
- By trascription factor - HrcA
- By taxonomy - Listeriaceae
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
Genome | Genes | Operons |
---|---|---|
Listeria innocua Clip11262 | 6 | 2 |
Listeria monocytogenes EGD-e | 6 | 2 |
Listeria seeligeri serovar 1/2b str. SLCC3954 | 6 | 2 |
Listeria welshimeri serovar 6b str. SLCC5334 | 6 | 2 |
Genes | Function | ||||
---|---|---|---|---|---|
CRON 1. | |||||
hrcA |
*
Listeria innocua Clip11262 Site: position = -41 score = 7.46002 sequence = TTAGCACTTGACGTTATTGAGTGCTAA Gene: lin1512: Heat shock response transcriptional regulator HrcA, HrcA family |
*
Listeria monocytogenes EGD-e Site: position = -41 score = 7.33877 sequence = TTAGCACTTGACGTTATGGAGTGCTAA Gene: lmo1475: Heat shock response transcriptional regulator HrcA, HrcA family |
*
Listeria seeligeri serovar 1/2b str. SLCC3954 Site: position = -41 score = 7.46002 sequence = TTAGCACTTGACGTTATTGAGTGCTAA Gene: lse_1392: Heat shock response transcriptional regulator HrcA, HrcA family |
*
Listeria welshimeri serovar 6b str. SLCC5334 Site: position = -41 score = 7.41436 sequence = TTAGCACTTGATGTTATTGAGTGCTAA Gene: lwe1490: Heat shock response transcriptional regulator HrcA, HrcA family |
Heat shock response transcriptional regulator HrcA, HrcA family |
grpE |
Gene: lin1511: Heat shock protein GrpE |
Gene: lmo1474: Heat shock protein GrpE |
Gene: lse_1391: Heat shock protein GrpE |
Gene: lwe1489: Heat shock protein GrpE |
Heat shock protein GrpE |
dnaK |
Gene: lin1510: Chaperone protein DnaK |
Gene: lmo1473: Chaperone protein DnaK |
Gene: lse_1390: Chaperone protein DnaK |
Gene: lwe1488: Chaperone protein DnaK |
Chaperone protein DnaK |
dnaJ |
Gene: lin1509: Chaperone protein DnaJ |
Gene: lmo1472: Chaperone protein DnaJ |
Gene: lse_1389: Chaperone protein DnaJ |
Gene: lwe1487: Chaperone protein DnaJ |
Chaperone protein DnaJ |
CRON 2. | |||||
groS |
*
Listeria innocua Clip11262 Site: position = -65 score = 7.58851 sequence = TTAGCACTCTAATGTGTCGAGTGCTAA Gene: lin2175: Heat shock protein 60 family co-chaperone GroES |
*
Listeria monocytogenes EGD-e Site: position = -65 score = 7.33051 sequence = TTAGCACTCTGATGTGTCGAGTGCTAA Gene: lmo2069: Heat shock protein 60 family co-chaperone GroES |
*
Listeria seeligeri serovar 1/2b str. SLCC3954 Site: position = -64 score = 7.58851 sequence = TTAGCACTCTAATGTGTCGAGTGCTAA Gene: lse_2058: Heat shock protein 60 family co-chaperone GroES |
*
Listeria welshimeri serovar 6b str. SLCC5334 Site: position = -65 score = 7.28485 sequence = TTAGCACTCTGATGCGTCGAGTGCTAA Gene: lwe2090: Heat shock protein 60 family co-chaperone GroES |
Heat shock protein 60 family co-chaperone GroES |
groL |
Gene: lin2174: Heat shock protein 60 family chaperone GroEL |
Gene: lmo2068: Heat shock protein 60 family chaperone GroEL |
Gene: lse_2057: Heat shock protein 60 family chaperone GroEL |
Gene: lwe2089: Heat shock protein 60 family chaperone GroEL |
Heat shock protein 60 family chaperone GroEL |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |