Regulog ModE - Chlorobiales

Properties
Regulator type:	Transcription factor
Regulator family:	ModE
Regulation mode:	repressor (activator)
Biological process:	Molybdopterin biosynthesis
Effector:	Molybdate
Phylum:	Chlorobi
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By trascription factor - ModE
By taxonomy - Chlorobiales
By TF family - ModE
By effector - Molybdate
By pathway - Molybdopterin biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Chlorobaculum parvum NCIB 8327	5	2
Chlorobium chlorochromatii CaD3	5	2
Chlorobium ferrooxidans DSM 13031	4	1
Chlorobium limicola DSM 245	10	2
Chlorobium phaeobacteroides BS1
Chlorobium phaeobacteroides DSM 266	9	3
Chloroherpeton thalassium ATCC 35110	5	2
Pelodictyon luteolum DSM 273	11	2
Pelodictyon phaeoclathratiforme BU-1	5	2
Prosthecochloris aestuarii DSM 271	7	2
Prosthecochloris vibrioformis DSM 265	11	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
modD	* Chlorobaculum parvum NCIB 8327 Site: position = -151 score = 6.35588 sequence = AATCGTTATTTCCTGTAAGACATATCGAAA Gene: Cpar_0446: Molybdenum transport system protein ModD	* Chlorobium chlorochromatii CaD3 Site: position = -29 score = 5.97806 sequence = CAGCGTTATAACCATAATCTCATAACGATA Gene: Cag_0412: Molybdenum transport system protein ModD	Chlorobium ferrooxidans DSM 13031 Gene: CferDRAFT_1919: Molybdenum transport system protein ModD	* Chlorobium limicola DSM 245 Site: position = -44 score = 5.18299 sequence = GGTCGGAATAACCTGAAAGATATAACGAAA Site: position = -341 score = 5.99819 sequence = ATTCGTTATATTCTTATTTGCATAACGAAT Gene: Clim_0375: Molybdenum transport system protein ModD	Chlorobium phaeobacteroides BS1 Gene: Cphamn1_1193: Molybdenum transport system protein ModD	* Chlorobium phaeobacteroides DSM 266 Site: position = -194 score = 5.35072 sequence = AAGCGTTATATTTGAAAACTCATTACGACC Site: position = -44 score = 5.03514 sequence = AACCGAAATACCTTTACTCATATAACGAAC Gene: Cpha266_0455: Molybdenum transport system protein ModD	Chloroherpeton thalassium ATCC 35110 Gene: Ctha_2495: Molybdenum transport system protein ModD	* Pelodictyon luteolum DSM 273 Site: position = -51 score = 6.26676 sequence = TATCGGTATGCAAGCGATTACATAACGCTT Gene: Plut_1707: Molybdenum transport system protein ModD	Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_0476: Molybdenum transport system protein ModD	Prosthecochloris aestuarii DSM 271 Gene: Paes_0908: Molybdenum transport system protein ModD	2 Prosthecochloris vibrioformis DSM 265* Site: position = -51 score = 6.34846 sequence = TATCGATATGCAAGCGATTACATAACGCTT Gene: Cvib_0108: Molybdenum transport system protein ModD Site: position = -140 score = 5.00043 sequence = GTTCGCTATATTCAAATAAACATAACGGTT Gene: Cvib_1491: Molybdenum transport system protein ModD	Molybdenum transport system protein ModD
modA	2 Chlorobaculum parvum NCIB 8327 Gene: Cpar_1631: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Cpar_0445: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Chlorobium chlorochromatii CaD3 Gene: Cag_0413: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	* Chlorobium ferrooxidans DSM 13031 Site: position = -45 score = 6.62875 sequence = CTCCGTTATTTCATATAATACATAACGAAA Gene: CferDRAFT_1916: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Chlorobium limicola DSM 245 Gene: Clim_0675: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Clim_0374: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Chlorobium phaeobacteroides BS1 Gene: Cphamn1_0451: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Chlorobium phaeobacteroides DSM 266 Gene: Cpha266_0454: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Cpha266_0441: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Chloroherpeton thalassium ATCC 35110 Gene: Ctha_1429: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Ctha_2014: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Pelodictyon luteolum DSM 273 Gene: Plut_1708: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Plut_1541: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_0475: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Ppha_1998: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Prosthecochloris aestuarii DSM 271* Site: position = -61 score = 5.84598 sequence = TGACGTTATTACATTAAAAACATAACGAAA Gene: Paes_1636: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Site: position = -104 score = 6.02397 sequence = TTCCGTTGTATATTATAAGTTATAACGAGT Gene: Paes_0414: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	2 Prosthecochloris vibrioformis DSM 265 Gene: Cvib_1492: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: Cvib_0109: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
modB	Chlorobaculum parvum NCIB 8327 Gene: Cpar_0444: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Chlorobium chlorochromatii CaD3 Gene: Cag_0414: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Chlorobium ferrooxidans DSM 13031 Gene: CferDRAFT_1917: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Chlorobium limicola DSM 245 Gene: Clim_0372: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Clim_0674: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Chlorobium phaeobacteroides BS1 Gene: Cphamn1_0453: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Chlorobium phaeobacteroides DSM 266 Gene: Cpha266_0453: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Cpha266_0442: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Chloroherpeton thalassium ATCC 35110 Gene: Ctha_1428: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Ctha_2013: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Pelodictyon luteolum DSM 273 Gene: Plut_1542: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Plut_1709: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_1999: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Ppha_0474: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Prosthecochloris aestuarii DSM 271 Gene: Paes_1637: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Paes_0416: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	2 Prosthecochloris vibrioformis DSM 265 Gene: Cvib_0110: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: Cvib_1493: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC	Chlorobaculum parvum NCIB 8327 Gene: Cpar_0443: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Chlorobium chlorochromatii CaD3 Gene: Cag_0415: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Chlorobium ferrooxidans DSM 13031 Gene: CferDRAFT_1918: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Chlorobium limicola DSM 245 Gene: Clim_0371: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Chlorobium phaeobacteroides BS1 Gene: Cphamn1_0454: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	2 Chlorobium phaeobacteroides DSM 266 Gene: Cpha266_0452: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Cpha266_0438: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Chloroherpeton thalassium ATCC 35110 Gene: Ctha_2015: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	2 Pelodictyon luteolum DSM 273 Gene: Plut_1710: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Plut_1712: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	2 Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_0473: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Ppha_1995: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Prosthecochloris aestuarii DSM 271 Gene: Paes_0417: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	2 Prosthecochloris vibrioformis DSM 265 Gene: Cvib_0111: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: Cvib_1494: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
modX	* Chlorobaculum parvum NCIB 8327 Site: position = -90 score = 6.09225 sequence = ATTCGTTATATTTGTAAGAACATAACGAAT Gene: Cpar_0441: Predicted molybdate-binding protein	Chlorobium chlorochromatii CaD3	Chlorobium ferrooxidans DSM 13031	Chlorobium limicola DSM 245 Gene: Clim_0373: Predicted molybdate-binding protein	Chlorobium phaeobacteroides BS1 Gene: Cphamn1_0452: Predicted molybdate-binding protein	2 Chlorobium phaeobacteroides DSM 266* Site: position = -266 score = 6.04426 sequence = TTCCGTTATTTTCTAAATTATATAACGCCA Gene: Cpha266_0439: Predicted molybdate-binding protein Gene: Cpha266_0436: Predicted molybdate-binding protein	* Chloroherpeton thalassium ATCC 35110 Site: position = -32 score = 5.85133 sequence = TTTCGTTATTTTCTCTTTGTTATAAGGCAA Gene: Ctha_2016: Predicted molybdate-binding protein	Pelodictyon luteolum DSM 273 Gene: Plut_1711: Predicted molybdate-binding protein	* Pelodictyon phaeoclathratiforme BU-1 Site: position = -298 score = 5.60826 sequence = ATACGTTGTTTACTAAATTATATAACGGAA Gene: Ppha_1996: Predicted molybdate-binding protein	Prosthecochloris aestuarii DSM 271 Gene: Paes_0415: Predicted molybdate-binding protein	Prosthecochloris vibrioformis DSM 265	Predicted molybdate-binding protein
omp_mod	Chlorobaculum parvum NCIB 8327 Gene: Cpar_1629: Predicted molybdenum transport TonB-dependent receptor	* Chlorobium chlorochromatii CaD3 Site: position = -51 score = 5.54552 sequence = GTGCGTTATATTTATAAATACATAACGAGC Gene: Cag_1253: Predicted molybdenum transport TonB-dependent receptor	Chlorobium ferrooxidans DSM 13031	* Chlorobium limicola DSM 245 Site: position = -79 score = 6.45903 sequence = TACCGTTATACCTTTTATTATATAACGAAT Gene: Clim_0676: Predicted molybdenum transport TonB-dependent receptor	Chlorobium phaeobacteroides BS1	* Chlorobium phaeobacteroides DSM 266 Site: position = -44 score = 6.17573 sequence = CATCGTTATATACTTATATTTATAACGAAA Site: position = -220 score = 6.04426 sequence = TGGCGTTATATAATTTAGAAAATAACGGAA Gene: Cpha266_0440: Predicted molybdenum transport TonB-dependent receptor	* Chloroherpeton thalassium ATCC 35110 Site: position = -36 score = 6.02797 sequence = TAACGATATATATTAAAGTATATAACGAAT Gene: Ctha_1484: Predicted molybdenum transport TonB-dependent receptor	* Pelodictyon luteolum DSM 273 Site: position = -156 score = 6.09545 sequence = TTTCGTTATATTCACACTTATATAACGAAT Gene: Plut_1540: Predicted molybdenum transport TonB-dependent receptor	* Pelodictyon phaeoclathratiforme BU-1 Site: position = -153 score = 5.60826 sequence = TTCCGTTATATAATTTAGTAAACAACGTAT Site: position = -41 score = 5.75572 sequence = TTTCGCTATATTTTTAAGGTAATAACGAAT Gene: Ppha_1997: Predicted molybdenum transport TonB-dependent receptor	Prosthecochloris aestuarii DSM 271	* Prosthecochloris vibrioformis DSM 265 Site: position = -47 score = 4.8241 sequence = CACCGTTATCACCTGAACAACACAACGAAA Gene: Cvib_1353: Predicted molybdenum transport TonB-dependent receptor	Predicted molybdenum transport TonB-dependent receptor
modE	Chlorobaculum parvum NCIB 8327 Gene: Cpar_1630: Molybdate-responsive transcriptional regulator ModE	Chlorobium chlorochromatii CaD3 Gene: Cag_1230: Molybdate-responsive transcriptional regulator ModE	Chlorobium ferrooxidans DSM 13031 Gene: CferDRAFT_1920: Molybdate-responsive transcriptional regulator ModE	Chlorobium limicola DSM 245 Gene: Clim_0673: Molybdate-responsive transcriptional regulator ModE	Chlorobium phaeobacteroides BS1	Chlorobium phaeobacteroides DSM 266 Gene: Cpha266_0735: Molybdate-responsive transcriptional regulator ModE	Chloroherpeton thalassium ATCC 35110 Gene: Ctha_1482: Molybdate-responsive transcriptional regulator ModE	Pelodictyon luteolum DSM 273 Gene: Plut_1543: Molybdate-responsive transcriptional regulator ModE	Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_1986: Molybdate-responsive transcriptional regulator ModE	Prosthecochloris aestuarii DSM 271 Gene: Paes_1638: Molybdate-responsive transcriptional regulator ModE	Prosthecochloris vibrioformis DSM 265 Gene: Cvib_1354: Molybdate-responsive transcriptional regulator ModE	Molybdate-responsive transcriptional regulator ModE
moaA	Chlorobaculum parvum NCIB 8327 Gene: Cpar_1349: Molybdenum cofactor biosynthesis protein MoaA	Chlorobium chlorochromatii CaD3	Chlorobium ferrooxidans DSM 13031	Chlorobium limicola DSM 245 Gene: Clim_0672: Molybdenum cofactor biosynthesis protein MoaA	Chlorobium phaeobacteroides BS1	Chlorobium phaeobacteroides DSM 266 Gene: Cpha266_0734: Molybdenum cofactor biosynthesis protein MoaA	Chloroherpeton thalassium ATCC 35110 Gene: Ctha_0875: Molybdenum cofactor biosynthesis protein MoaA	Pelodictyon luteolum DSM 273 Gene: Plut_1544: Molybdenum cofactor biosynthesis protein MoaA	Pelodictyon phaeoclathratiforme BU-1 Gene: Ppha_1339: Molybdenum cofactor biosynthesis protein MoaA	Prosthecochloris aestuarii DSM 271 Gene: Paes_2126: Molybdenum cofactor biosynthesis protein MoaA	Prosthecochloris vibrioformis DSM 265 Gene: Cvib_1355: Molybdenum cofactor biosynthesis protein MoaA	Molybdenum cofactor biosynthesis protein MoaA

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ModE - Chlorobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --