Regulog HisR - Clostridia-3

Properties
Regulator type:	Transcription factor
Regulator family:	TrpR
Regulation mode:	repressor
Biological process:	Histidine biosynthesis
Effector:	Histidine
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 37 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - HisR
By TF family - TrpR
By effector - Histidine
By pathway - Histidine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides pectinophilus ATCC 43243	1	1
Blautia hansenii DSM 20583	4	2
Bryantella formatexigens DSM 14469	3	1
Clostridiales bacterium 1_7_47_FAA	10	3
Clostridium bolteae ATCC BAA-613	10	3
Clostridium nexile DSM 1787	9	3
Clostridium scindens ATCC 35704	9	3
Dorea formicigenerans ATCC 27755	9	3
Dorea longicatena DSM 13814	10	3
Eubacterium eligens ATCC 27750	8	3
Eubacterium rectale ATCC 33656	9	3
Roseburia intestinalis L1-82	3	2
Ruminococcus gnavus ATCC 29149	9	3
Ruminococcus lactaris ATCC 29176	9	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
hisZ	* Bacteroides pectinophilus ATCC 43243 Site: position = -41 score = 5.47703 sequence = CACGTTACCACGCTAAAGTG Gene: BACPEC_00055: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	Blautia hansenii DSM 20583	* Bryantella formatexigens DSM 14469 Site: position = -109 score = 5.09212 sequence = CACGGTACCACGCTAAAGTG Gene: BRYFOR_02963: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Clostridiales bacterium 1_7_47_FAA Site: position = -65 score = 5.07306 sequence = CACTTTACTACGAAAAAGTG Gene: Cbac1_010100026804: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Clostridium bolteae ATCC BAA-613 Site: position = -63 score = 4.79204 sequence = CACTTTACCATAGAAAAGCA Gene: CLOBOL_03939: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Clostridium nexile DSM 1787 Site: position = -40 score = 4.42194 sequence = TATTTTAATATGGTAGCGTA Site: position = -32 score = 4.5711 sequence = TATGGTAGCGTAATAAAGTA Gene: CLONEX_02879: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Clostridium scindens ATCC 35704 Site: position = -47 score = 5.13184 sequence = CATGGTAGCACACTAAAGTG Gene: CLOSCI_00467: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Dorea formicigenerans ATCC 27755 Site: position = -35 score = 5.01336 sequence = TATGGTAGCACGCTAAAGTG Gene: DORFOR_01586: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Dorea longicatena DSM 13814 Site: position = -50 score = 4.97089 sequence = CATGGTAGCACACTAAAGTA Gene: DORLON_00474: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Eubacterium eligens ATCC 27750 Site: position = -47 score = 4.44689 sequence = CACTTCAACGCATTAAAGCA Gene: EUBELI_01024: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Eubacterium rectale ATCC 33656 Site: position = 23 score = 4.64842 sequence = CACTTTACTACAAGAAAGCG Gene: EUBREC_1685: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Roseburia intestinalis L1-82 Site: position = -89 score = 5.0601 sequence = CAAGGTAGCACACTAAAGTG Gene: ROSINTL182_03943: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Ruminococcus gnavus ATCC 29149 Site: position = -37 score = 5.07438 sequence = TGTATTAGCATAGTAAAGTG Gene: RUMGNA_02473: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	* Ruminococcus lactaris ATCC 29176 Site: position = -40 score = 4.85221 sequence = CGTATTAGCAGACTAAAGTG Gene: RUMLAC_00416: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
hisG	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469 Gene: BRYFOR_02964: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100026809: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03938: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Clostridium nexile DSM 1787 Gene: CLONEX_02878: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Clostridium scindens ATCC 35704 Gene: CLOSCI_00468: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Dorea formicigenerans ATCC 27755 Gene: DORFOR_01585: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Dorea longicatena DSM 13814 Gene: DORLON_00475: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Eubacterium eligens ATCC 27750 Gene: EUBELI_01023: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Eubacterium rectale ATCC 33656 Gene: EUBREC_1686: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Roseburia intestinalis L1-82 Gene: ROSINTL182_03944: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02472: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_00417: ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)
hisD	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469 Gene: BRYFOR_02965: Histidinol dehydrogenase (EC 1.1.1.23)	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100026814: Histidinol dehydrogenase (EC 1.1.1.23)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03937: Histidinol dehydrogenase (EC 1.1.1.23)	Clostridium nexile DSM 1787 Gene: CLONEX_02877: Histidinol dehydrogenase (EC 1.1.1.23)	Clostridium scindens ATCC 35704 Gene: CLOSCI_00469: Histidinol dehydrogenase (EC 1.1.1.23)	Dorea formicigenerans ATCC 27755 Gene: DORFOR_01584: Histidinol dehydrogenase (EC 1.1.1.23)	Dorea longicatena DSM 13814 Gene: DORLON_00476: Histidinol dehydrogenase (EC 1.1.1.23)	Eubacterium eligens ATCC 27750 Gene: EUBELI_01022: Histidinol dehydrogenase (EC 1.1.1.23)	Eubacterium rectale ATCC 33656 Gene: EUBREC_1687: Histidinol dehydrogenase (EC 1.1.1.23)	Roseburia intestinalis L1-82 Gene: ROSINTL182_00076: Histidinol dehydrogenase (EC 1.1.1.23)	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02471: Histidinol dehydrogenase (EC 1.1.1.23)	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_00418: Histidinol dehydrogenase (EC 1.1.1.23)	Histidinol dehydrogenase (EC 1.1.1.23)
DORLON_00477	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814 Gene: DORLON_00477: hypothetical protein	Eubacterium eligens ATCC 27750	Eubacterium rectale ATCC 33656	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149	Ruminococcus lactaris ATCC 29176	hypothetical protein
hisB	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100026819: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03936: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Clostridium nexile DSM 1787 Gene: CLONEX_02876: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Clostridium scindens ATCC 35704 Gene: CLOSCI_00470: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Dorea formicigenerans ATCC 27755 Gene: DORFOR_01583: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Dorea longicatena DSM 13814 Gene: DORLON_00478: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Eubacterium eligens ATCC 27750 Gene: EUBELI_01021: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Eubacterium rectale ATCC 33656 Gene: EUBREC_1688: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Roseburia intestinalis L1-82 Gene: ROSINTL182_00075: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02470: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_00419: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
hisIE	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03934: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Clostridium nexile DSM 1787 Gene: CLONEX_02875: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Clostridium scindens ATCC 35704 Gene: CLOSCI_00471: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Dorea formicigenerans ATCC 27755 Gene: DORFOR_01582: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Dorea longicatena DSM 13814 Gene: DORLON_00479: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Eubacterium eligens ATCC 27750	Eubacterium rectale ATCC 33656 Gene: EUBREC_1689: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Roseburia intestinalis L1-82 Gene: ROSINTL182_00074: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02469: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_00420: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
Cbac1_010100026824	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100026824: hypothetical protein	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814	Eubacterium eligens ATCC 27750	Eubacterium rectale ATCC 33656	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149	Ruminococcus lactaris ATCC 29176	hypothetical protein
hisA	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100026829: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03935: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814	Eubacterium eligens ATCC 27750 Gene: EUBELI_01020: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Eubacterium rectale ATCC 33656	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149	Ruminococcus lactaris ATCC 29176	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)

CRON 2.
hisX	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_00692: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Blautia hansenii DSM 20583 Site: position = -61 score = 4.43487 sequence = CAATTTAGCATAGTAGAGAA Gene: BLAHAN_01245: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	Bryantella formatexigens DSM 14469 Gene: BRYFOR_01357: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Clostridiales bacterium 1_7_47_FAA Site: position = -59 score = 5.59425 sequence = CACTTTAGTGTGCTAATATG Gene: Cbac1_010100022442: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Clostridium bolteae ATCC BAA-613 Site: position = -25 score = 5.26759 sequence = CGCTTTAGTGTGCTAATATG Gene: CLOBOL_01668: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Clostridium nexile DSM 1787 Site: position = -54 score = 4.82891 sequence = TAATTTAGTGTGGTAGAGTA Gene: CLONEX_03079: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Clostridium scindens ATCC 35704 Site: position = -91 score = 5.59682 sequence = CAATTTAGCGTGGTAAAGTA Gene: CLOSCI_00784: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Dorea formicigenerans ATCC 27755 Site: position = -154 score = 5.27016 sequence = CGATTTAGCGTGGTAAAGTA Gene: DORFOR_00662: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Dorea longicatena DSM 13814 Site: position = -94 score = 5.22472 sequence = GATTTTAGTGTGATAAAGTA Gene: DORLON_00748: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Eubacterium eligens ATCC 27750 Site: position = -44 score = 5.10408 sequence = TGATTTACTGTGGTAAAGTG Gene: EUBELI_01397: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Eubacterium rectale ATCC 33656 Site: position = -83 score = 5.16519 sequence = TACTTTAGCGTGATAATTTG Gene: EUBREC_2005: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	Roseburia intestinalis L1-82	* Ruminococcus gnavus ATCC 29149 Site: position = -64 score = 5.52734 sequence = CAGTTTAGTATAGTAAAGTG Gene: RUMGNA_00302: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	* Ruminococcus lactaris ATCC 29176 Site: position = -70 score = 4.59371 sequence = GACTTTACCATGGTGCAGTG Gene: RUMLAC_01337: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)	Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
hisY	Bacteroides pectinophilus ATCC 43243	Blautia hansenii DSM 20583 Gene: BLAHAN_01244: Histidine ABC transporter, permease protein	Bryantella formatexigens DSM 14469 Gene: BRYFOR_01358: Histidine ABC transporter, permease protein	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100022447: Histidine ABC transporter, permease protein	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01669: Histidine ABC transporter, permease protein	Clostridium nexile DSM 1787 Gene: CLONEX_03078: Histidine ABC transporter, permease protein	Clostridium scindens ATCC 35704 Gene: CLOSCI_00783: Histidine ABC transporter, permease protein	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00661: Histidine ABC transporter, permease protein	Dorea longicatena DSM 13814 Gene: DORLON_00747: Histidine ABC transporter, permease protein	Eubacterium eligens ATCC 27750	Eubacterium rectale ATCC 33656 Gene: EUBREC_2004: Histidine ABC transporter, permease protein	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_00303: Histidine ABC transporter, permease protein	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01338: Histidine ABC transporter, permease protein	Histidine ABC transporter, permease protein
hisZ	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_00691: Histidine ABC transporter, ATP-binding protein	Blautia hansenii DSM 20583 Gene: BLAHAN_01243: Histidine ABC transporter, ATP-binding protein	Bryantella formatexigens DSM 14469 Gene: BRYFOR_01359: Histidine ABC transporter, ATP-binding protein	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100022452: Histidine ABC transporter, ATP-binding protein	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01670: Histidine ABC transporter, ATP-binding protein	Clostridium nexile DSM 1787 Gene: CLONEX_03077: Histidine ABC transporter, ATP-binding protein	Clostridium scindens ATCC 35704 Gene: CLOSCI_00782: Histidine ABC transporter, ATP-binding protein	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00660: Histidine ABC transporter, ATP-binding protein	Dorea longicatena DSM 13814 Gene: DORLON_00746: Histidine ABC transporter, ATP-binding protein	Eubacterium eligens ATCC 27750 Gene: EUBELI_01396: Histidine ABC transporter, ATP-binding protein	Eubacterium rectale ATCC 33656 Gene: EUBREC_2003: Histidine ABC transporter, ATP-binding protein	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_00304: Histidine ABC transporter, ATP-binding protein	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01339: Histidine ABC transporter, ATP-binding protein	Histidine ABC transporter, ATP-binding protein

CRON 3.
hisR	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_00270: Predicted histidine repressor, TrpR family	* Blautia hansenii DSM 20583 Site: position = -68 score = 4.63229 sequence = AAATTTACTGTGCTACTATA Gene: BLAHAN_01640: Predicted histidine repressor, TrpR family	Bryantella formatexigens DSM 14469 Gene: BRYFOR_00847: Predicted histidine repressor, TrpR family	* Clostridiales bacterium 1_7_47_FAA Site: position = -167 score = 5.47036 sequence = AACTTTAATATGTTAAAATG Gene: Cbac1_010100017829: Predicted histidine repressor, TrpR family	* Clostridium bolteae ATCC BAA-613 Site: position = -113 score = 5.5397 sequence = GACTTTAATATGCTAAAATG Gene: CLOBOL_07128: Predicted histidine repressor, TrpR family	* Clostridium nexile DSM 1787 Site: position = -54 score = 4.98994 sequence = GAGTTTACTGTGCTAAAATA Gene: CLONEX_00021: Predicted histidine repressor, TrpR family	* Clostridium scindens ATCC 35704 Site: position = -57 score = 5.44201 sequence = AAATTTAGTGTGTTAAAATG Gene: CLOSCI_02856: Predicted histidine repressor, TrpR family	* Dorea formicigenerans ATCC 27755 Site: position = -61 score = 5.31839 sequence = AAATTTACTGTGTTAAAATG Gene: DORFOR_03026: Predicted histidine repressor, TrpR family	* Dorea longicatena DSM 13814 Site: position = 24 score = 5.33518 sequence = GAATTTAGTGTGTTAAAATG Gene: DORLON_01427: Predicted histidine repressor, TrpR family	* Eubacterium eligens ATCC 27750 Site: position = -68 score = 4.67833 sequence = AACTTCACTGTGTTAAAATT Gene: EUBELI_01562: Predicted histidine repressor, TrpR family	* Eubacterium rectale ATCC 33656 Site: position = -37 score = 5.29104 sequence = AACTTTAATATGTTAAAATT Gene: EUBREC_1393: Predicted histidine repressor, TrpR family	* Roseburia intestinalis L1-82 Site: position = -75 score = 5.64652 sequence = AACTTTAATATGCTAAAATG Gene: ROSINTL182_04526: Predicted histidine repressor, TrpR family	* Ruminococcus gnavus ATCC 29149 Site: position = -58 score = 5.37932 sequence = AAATTTAGTGTGATAAAATG Gene: RUMGNA_03779: Predicted histidine repressor, TrpR family	* Ruminococcus lactaris ATCC 29176 Site: position = -59 score = 5.61817 sequence = AAATTTAGTGTGCTAAAATG Gene: RUMLAC_00772: Predicted histidine repressor, TrpR family	Predicted histidine repressor, TrpR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog HisR - Clostridia-3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --