Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog THA_1503 - Thermotogales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug resistance; Multidrug efflux
Effector:
Phylum: Thermotogae
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Fervidobacterium nodosum Rt17-B1 4 1
Petrotoga mobilis SJ95 4 1
Thermosipho africanus TCF52B 4 1
Thermosipho melanesiensis BI429 4 1
Thermotoga lettingae TMO 4 1
Thermotoga maritima MSB8
Thermotoga naphthophila RKU-10
Thermotoga neapolitana DSM 4359
Thermotoga petrophila RKU-1
Thermotoga sp. RQ2
Thermotogales bacterium TBF 19.5.1 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
THA_1504
*
Fervidobacterium nodosum Rt17-B1

Site:
position = -77
score = 7.50011
sequence = AGTGTTATATAATTATATAACACT

Gene: Fnod_0542: hypothetical protein
*
Petrotoga mobilis SJ95

Site:
position = -46
score = 6.1537
sequence = TGTGTTATAGTTAAATATAACAAC

Gene: Pmob_0665: hypothetical protein
*
Thermosipho africanus TCF52B

Site:
position = -56
score = 6.66318
sequence = TGTGTTATACTTTTATAGAACACT

Gene: THA_1504: hypothetical protein
*
Thermosipho melanesiensis BI429

Site:
position = -1
score = 6.40059
sequence = TGTGTTATACTTATATAGAACAAT

Gene: Tmel_1358: hypothetical protein
*
Thermotoga lettingae TMO

Site:
position = -46
score = 6.45247
sequence = AGTGTTCTAATAATATAGAACAAT

Gene: Tlet_0734: hypothetical protein
 
Thermotoga maritima MSB8
 
Thermotoga naphthophila RKU-10
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga sp. RQ2
*
Thermotogales bacterium TBF 19.5.1

Site:
position = -49
score = 6.25601
sequence = AGTGTTCTAATAAAGTAGAACACT

Gene: Kole_0655: hypothetical protein
hypothetical protein
THA_1503
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0541: Transcriptional regulator, GntR family
 
Petrotoga mobilis SJ95

Gene: Pmob_0664: Transcriptional regulator, GntR family
 
Thermosipho africanus TCF52B

Gene: THA_1503: Transcriptional regulator, GntR family
 
Thermosipho melanesiensis BI429

Gene: Tmel_1357: Transcriptional regulator, GntR family
 
Thermotoga lettingae TMO

Gene: Tlet_0735: Transcriptional regulator, GntR family
 
Thermotoga maritima MSB8
 
Thermotoga naphthophila RKU-10
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga sp. RQ2
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_0656: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
THA_1502
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0540: ABC transporter, permease protein
 
Petrotoga mobilis SJ95

Gene: Pmob_0663: ABC transporter, permease protein
 
Thermosipho africanus TCF52B

Gene: THA_1502: ABC transporter, permease protein
 
Thermosipho melanesiensis BI429

Gene: Tmel_1356: ABC transporter, permease protein
 
Thermotoga lettingae TMO

Gene: Tlet_0736: ABC transporter, permease protein
 
Thermotoga maritima MSB8
 
Thermotoga naphthophila RKU-10
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga sp. RQ2
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_0657: ABC transporter, permease protein
ABC transporter, permease protein
THA_1501
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0539: ABC transporter, ATP-binding protein
 
Petrotoga mobilis SJ95

Gene: Pmob_0662: ABC transporter, ATP-binding protein
 
Thermosipho africanus TCF52B

Gene: THA_1501: ABC transporter, ATP-binding protein
 
Thermosipho melanesiensis BI429

Gene: Tmel_1355: ABC transporter, ATP-binding protein
 
Thermotoga lettingae TMO

Gene: Tlet_0737: ABC transporter, ATP-binding protein
 
Thermotoga maritima MSB8
 
Thermotoga naphthophila RKU-10
 
Thermotoga neapolitana DSM 4359
 
Thermotoga petrophila RKU-1
 
Thermotoga sp. RQ2
 
Thermotogales bacterium TBF 19.5.1

Gene: Kole_0658: ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD