Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog RhaR - Micrococcineae

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 29 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Arthrobacter aurescens TC1 11 4
Arthrobacter chlorophenolicus A6 19 5
Arthrobacter sp. FB24 18 7
Beutenbergia cavernae DSM 12333 3 1
Brachybacterium faecium DSM 4810 7 4
Brevibacterium linens BL2
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ramA
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_0426: Alfa-L-rhamnosidase (EC 3.2.1.40)
 
Arthrobacter sp. FB24

Gene: Arth_1838: Alfa-L-rhamnosidase (EC 3.2.1.40)
 
Beutenbergia cavernae DSM 12333
*
Brachybacterium faecium DSM 4810

Site:
position = -91
score = 4.62958
sequence = AGCTTGAGTCGTTTCACACC

Gene: Bfae_29670: Alfa-L-rhamnosidase (EC 3.2.1.40)
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_0105: Alfa-L-rhamnosidase (EC 3.2.1.40)
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Alfa-L-rhamnosidase (EC 3.2.1.40)
 
CRON 2.
rhaY
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter sp. FB24
 
Beutenbergia cavernae DSM 12333
*
Brachybacterium faecium DSM 4810

Site:
position = -136
score = 5.47225
sequence = GCTTTGAAACGAATCAATAT

Gene: Bfae_28350: Predicted L-rhamnose permease RhaY
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted L-rhamnose permease RhaY
ramA2
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter sp. FB24
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810

Gene: Bfae_28340: alpha-L-rhamnosidase
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
alpha-L-rhamnosidase
 
CRON 3.
yteU
 
Arthrobacter aurescens TC1
*
Arthrobacter chlorophenolicus A6

Site:
position = -136
score = 5.21158
sequence = GCTGTGTAACGATTCAAAAA

Gene: Achl_3116: Putative membrane enzyme for rhamnogalaturonan degradation
*
Arthrobacter sp. FB24

Site:
position = -135
score = 5.41399
sequence = ATTATGTAACGATTCAAAAT

Gene: Arth_3317: Putative membrane enzyme for rhamnogalaturonan degradation
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Putative membrane enzyme for rhamnogalaturonan degradation
Achl_3115
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3115: hypothetical protein
 
Arthrobacter sp. FB24
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
hypothetical protein
ytcQ
 
Arthrobacter aurescens TC1
*
Arthrobacter chlorophenolicus A6

Site:
position = -68
score = 4.77929
sequence = GAAATGAAACGTATCAACCT

Gene: Achl_3114: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
*
Arthrobacter sp. FB24

Site:
position = -155
score = 5.09258
sequence = TGAATGAAACGTATCAATAT

Gene: Arth_3316: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
yteP
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3113: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
 
Arthrobacter sp. FB24

Gene: Arth_3315: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
ytcP
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3112: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
 
Arthrobacter sp. FB24

Gene: Arth_3314: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
yesT
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3111: Rhamnogalacturonan acetylesterase
 
Arthrobacter sp. FB24

Gene: Arth_3313: Rhamnogalacturonan acetylesterase
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Rhamnogalacturonan acetylesterase
yesU
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3110: hypothetical protein
 
Arthrobacter sp. FB24

Gene: Arth_3312: hypothetical protein
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
hypothetical protein
 
CRON 4.
rhiN
*
Arthrobacter aurescens TC1

Site:
position = -91
score = 4.9468
sequence = ATATTGTATCGATTCAGAAC

Gene: AAur_3309: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
*
Arthrobacter chlorophenolicus A6

Site:
position = -92
score = 4.91745
sequence = ATATTGTATCGTTTCAGAAG

Gene: Achl_3124: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
*
Arthrobacter sp. FB24

Site:
position = -100
score = 5.06509
sequence = ATATTGTATCGTTTCAGAAA

Gene: Arth_3324: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
rhiF
 
Arthrobacter aurescens TC1

Gene: AAur_3308: Putatuve rhamnogalacturonides ABC transporter, permease component 1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3123: Putatuve rhamnogalacturonides ABC transporter, permease component 1
 
Arthrobacter sp. FB24

Gene: Arth_3323: Putatuve rhamnogalacturonides ABC transporter, permease component 1
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Putatuve rhamnogalacturonides ABC transporter, permease component 1
rhiG
 
Arthrobacter aurescens TC1

Gene: AAur_3307: Putatuve rhamnogalacturonides ABC transporter, permease component 2
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3122: Putatuve rhamnogalacturonides ABC transporter, permease component 2
 
Arthrobacter sp. FB24

Gene: Arth_3322: Putatuve rhamnogalacturonides ABC transporter, permease component 2
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Putatuve rhamnogalacturonides ABC transporter, permease component 2
AAur_3306
 
Arthrobacter aurescens TC1

Gene: AAur_3306: hypothetical protein
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3121: hypothetical protein
 
Arthrobacter sp. FB24

Gene: Arth_3321: hypothetical protein
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
hypothetical protein
AAur_3305
 
Arthrobacter aurescens TC1

Gene: AAur_3305: putative transmembrane efflux protein (MFS)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3120: putative transmembrane efflux protein (MFS)
 
Arthrobacter sp. FB24

Gene: Arth_3320: putative transmembrane efflux protein (MFS)
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
putative transmembrane efflux protein (MFS)
 
CRON 5.
AAur_3304
*
Arthrobacter aurescens TC1

Site:
position = -160
score = 5.13077
sequence = GGTTTGAATCGTTACATTTT

Gene: AAur_3304: oxidoreductase domain protein
*
Arthrobacter chlorophenolicus A6

Site:
position = -123
score = 5.21158
sequence = TTTTTGAATCGTTACACAGC

Gene: Achl_3117: oxidoreductase domain protein
*
Arthrobacter sp. FB24

Site:
position = -193
score = 5.41399
sequence = ATTTTGAATCGTTACATAAT

Gene: Arth_3318: oxidoreductase domain protein
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
oxidoreductase domain protein
ramA1
 
Arthrobacter aurescens TC1
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3118: alpha-L-rhamnosidase
*
Arthrobacter sp. FB24

Site:
position = -116
score = 5.3567
sequence = GCTTTGAATCGTTACATTGC

Gene: Arth_1969: alpha-L-rhamnosidase
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
alpha-L-rhamnosidase
 
CRON 6.
rhaM
*
Arthrobacter aurescens TC1

Site:
position = -57
score = 5.16913
sequence = AATTTGAATCGTAACAAATG

Site:
position = -43
score = 5.52457
sequence = CAAATGAAACGATTCAAAGA

Gene: AAur_3714: L-rhamnose mutarotase
*
Arthrobacter chlorophenolicus A6

Site:
position = -57
score = 5.26867
sequence = ACTTTGAATCGTACCAATGA

Site:
position = -44
score = 5.52457
sequence = CCAATGAAACGATTCAAATA

Gene: Achl_3108: L-rhamnose mutarotase
*
Arthrobacter sp. FB24

Site:
position = -57
score = 5.46497
sequence = ACTTTGAATCGTAACAATGA

Site:
position = -44
score = 5.80469
sequence = ACAATGAAACGATTCAAAGA

Gene: Arth_3307: L-rhamnose mutarotase
 
Beutenbergia cavernae DSM 12333
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
L-rhamnose mutarotase
rhaI
 
Arthrobacter aurescens TC1

Gene: AAur_3715: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3107: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
 
Arthrobacter sp. FB24

Gene: Arth_3306: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
*
Beutenbergia cavernae DSM 12333

Site:
position = -63
score = 5.27968
sequence = GCTATGAATCGATTCAACCT

Gene: Bcav_3624: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
*
Brachybacterium faecium DSM 4810

Site:
position = -183
score = 4.62042
sequence = ATCCTGAGACGTTTCAAGAA

Site:
position = -119
score = 5.03797
sequence = GTGTTGAGTCGTTTCAAACA

Gene: Bfae_29630: Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted L-rhamnose isomerase RhaI (EC 5.3.1.14)
rhaEW
 
Arthrobacter aurescens TC1

Gene: AAur_3716: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3106: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
 
Arthrobacter sp. FB24

Gene: Arth_3305: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3625: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_29640: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)
rhaB
 
Arthrobacter aurescens TC1

Gene: AAur_3717: Rhamnulokinase (EC 2.7.1.5)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3105: Rhamnulokinase (EC 2.7.1.5)
 
Arthrobacter sp. FB24

Gene: Arth_3304: Rhamnulokinase (EC 2.7.1.5)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3626: Rhamnulokinase (EC 2.7.1.5)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_29650: Rhamnulokinase (EC 2.7.1.5)
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Rhamnulokinase (EC 2.7.1.5)
 
CRON 7.
rhaR
*
Arthrobacter aurescens TC1

Site:
position = -103
score = 5.52457
sequence = TCTTTGAATCGTTTCATTTG

Site:
position = -89
score = 5.16913
sequence = CATTTGTTACGATTCAAATT

Gene: AAur_3713: Transcriptional regulator of rhamnose utilization, LacI family
*
Arthrobacter chlorophenolicus A6

Site:
position = -126
score = 5.52457
sequence = TATTTGAATCGTTTCATTGG

Site:
position = -113
score = 5.26867
sequence = TCATTGGTACGATTCAAAGT

Gene: Achl_3109: Transcriptional regulator of rhamnose utilization, LacI family
*
Arthrobacter sp. FB24

Site:
position = -203
score = 5.80469
sequence = TCTTTGAATCGTTTCATTGT

Site:
position = -190
score = 5.46497
sequence = TCATTGTTACGATTCAAAGT

Gene: Arth_3308: Transcriptional regulator of rhamnose utilization, LacI family
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3608: Transcriptional regulator of rhamnose utilization, LacI family
*
Brachybacterium faecium DSM 4810

Site:
position = -150
score = 4.62958
sequence = GGTGTGAAACGACTCAAGCT

Gene: Bfae_29660: Transcriptional regulator of rhamnose utilization, LacI family
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Renibacterium salmoninarum ATCC 33209
 
Tropheryma whipplei str. Twist
Transcriptional regulator of rhamnose utilization, LacI family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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