Regulog GntR - Pasteurellales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pasteurellales
- By trascription factor - GntR
- By TF family - LacI
- By effector - Gluconate
- By pathway - Gluconate utilization
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | ||
| Aggregatibacter aphrophilus NJ8700 | 2 | 2 |
| Pasteurella multocida subsp. multocida str. Pm70 | 2 | 2 |
| Mannheimia succiniciproducens MBEL55E | 5 | 2 |
| Actinobacillus succinogenes 130Z | 4 | 2 |
| Haemophilus somnus 2336 | 4 | 2 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2 | 2 |
| Haemophilus ducreyi 35000HP | ||
| Haemophilus parasuis SH0165 | 2 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| gntK |
|
*
Aggregatibacter aphrophilus NJ8700 Site: position = -195 score = 6.19473 sequence = AAATGTTACTGGTAACATAC Site: position = -64 score = 5.89636 sequence = GATTGTTACCGATAACATTT Gene: NT05HA_1088: Thermoresistant gluconokinase (EC 2.7.1.12) |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -232 score = 6.15707 sequence = TATTGTTACCAGTAACATAA Site: position = -70 score = 5.62489 sequence = TGATGTTACCAGTAACGTTT Gene: PM0792: Thermoresistant gluconokinase (EC 2.7.1.12) |
*
Mannheimia succiniciproducens MBEL55E Site: position = -201 score = 5.64764 sequence = ATTGGTTACTGGTAACATAC Site: position = -70 score = 5.50317 sequence = TATTGTTATCGGTAACTGTT Gene: MS0957: Thermoresistant gluconokinase (EC 2.7.1.12) |
*
Actinobacillus succinogenes 130Z Site: position = -209 score = 6.08368 sequence = GATTGTTACCAGTAACATAT Site: position = -67 score = 6.17209 sequence = AAATGTTACTGGTAACAGAT Gene: Asuc_1154: Thermoresistant gluconokinase (EC 2.7.1.12) |
*
Haemophilus somnus 2336 Site: position = -227 score = 6.08365 sequence = TTCTGTTACTGGTAACATAT Site: position = -75 score = 5.27381 sequence = AAGTGTTATTGGTAACTTTT Gene: HSM_0704: Thermoresistant gluconokinase (EC 2.7.1.12) |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -155 score = 6.20717 sequence = AATTGTTACTGGTAACATAA Site: position = -66 score = 6.03434 sequence = TAATGTTACCTGTAACATTA Gene: APP7_1726: Thermoresistant gluconokinase (EC 2.7.1.12) |
|
*
Haemophilus parasuis SH0165 Site: position = -179 score = 6.25727 sequence = AATTGTTACTGGTAACATAT Site: position = -40 score = 5.57588 sequence = TTCAGTTATCGGTAACATTT Gene: HAPS_1788: Thermoresistant gluconokinase (EC 2.7.1.12) |
Thermoresistant gluconokinase (EC 2.7.1.12) |
| CRON 2. | ||||||||||
| idnD |
|
|
|
*
Mannheimia succiniciproducens MBEL55E Site: position = -167 score = 5.50317 sequence = AACAGTTACCGATAACAATA Site: position = -36 score = 5.64764 sequence = GTATGTTACCAGTAACCAAT Gene: MS0956: L-idonate 5-dehydrogenase (EC 1.1.1.264) |
*
Actinobacillus succinogenes 130Z Site: position = -36 score = 6.08368 sequence = ATATGTTACTGGTAACAATC Site: position = -178 score = 6.17209 sequence = ATCTGTTACCAGTAACATTT Gene: Asuc_1155: L-idonate 5-dehydrogenase (EC 1.1.1.264) |
*
Haemophilus somnus 2336 Site: position = -189 score = 5.27381 sequence = AAAAGTTACCAATAACACTT Site: position = -37 score = 6.08365 sequence = ATATGTTACCAGTAACAGAA Gene: HSM_0703: L-idonate 5-dehydrogenase (EC 1.1.1.264) |
|
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L-idonate 5-dehydrogenase (EC 1.1.1.264) |
| idnO |
|
|
|
Gene: MS0955: Gluconate 5-dehydrogenase (EC 1.1.1.69) |
Gene: Asuc_1156: Gluconate 5-dehydrogenase (EC 1.1.1.69) |
Gene: HSM_0702: Gluconate 5-dehydrogenase (EC 1.1.1.69) |
|
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Gluconate 5-dehydrogenase (EC 1.1.1.69) |
| gntU |
|
*
Aggregatibacter aphrophilus NJ8700 Site: position = -171 score = 5.89636 sequence = AAATGTTATCGGTAACAATC Site: position = -40 score = 6.19473 sequence = GTATGTTACCAGTAACATTT Gene: NT05HA_1087: Low-affinity gluconate transporter |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -202 score = 5.62489 sequence = AAACGTTACTGGTAACATCA Site: position = -40 score = 6.15707 sequence = TTATGTTACTGGTAACAATA Gene: PM0793: Low-affinity gluconate transporter |
2
Mannheimia succiniciproducens MBEL55E Gene: MS0953: Low-affinity gluconate transporter Gene: MS0954: Low-affinity gluconate transporter |
Gene: Asuc_1157: Low-affinity gluconate transporter |
Gene: HSM_0701: Low-affinity gluconate transporter |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -131 score = 6.03434 sequence = TAATGTTACAGGTAACATTA Site: position = -42 score = 6.20717 sequence = TTATGTTACCAGTAACAATT Gene: APP7_1725: Low-affinity gluconate transporter |
|
*
Haemophilus parasuis SH0165 Site: position = -38 score = 6.25727 sequence = ATATGTTACCAGTAACAATT Site: position = -177 score = 5.57588 sequence = AAATGTTACCGATAACTGAA Gene: HAPS_1787: Low-affinity gluconate transporter |
Low-affinity gluconate transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |