Regulog AglR - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Alpha-glucosides utilization |
| Effector: | Alpha-glucoside; Maltose; Sucrose; Trehalose |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - LacI
- By effector - Alpha-glucoside
- By effector - Maltose
- By effector - Sucrose
- By effector - Trehalose
- By pathway - Alpha-glucosides utilization
| Genome | Genes | Operons |
|---|---|---|
| Rhodobacter sphaeroides 2.4.1 | ||
| Paracoccus denitrificans PD1222 | ||
| Jannaschia sp. CCS1 | 8 | 2 |
| Rhodobacterales bacterium HTCC2654 | 8 | 2 |
| Oceanicola granulosus HTCC2516 | 7 | 2 |
| Oceanicola batsensis HTCC2597 | ||
| Loktanella vestfoldensis SKA53 | 8 | 2 |
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | ||
| Sulfitobacter sp. EE-36 | ||
| Silicibacter TM1040 | 7 | 2 |
| Silicibacter pomeroyi DSS-3 | ||
| Roseobacter sp. MED193 | ||
| Hyphomonas neptunium ATCC 15444 | ||
| Oceanicaulis alexandrii HTCC2633 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| aglE |
Gene: RSP_2873: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Jannaschia sp. CCS1 Site: position = -104 score = 4.90517 sequence = ACCCCAAAGCGCTTTGAAAA Gene: Jann_1946: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Rhodobacterales bacterium HTCC2654 Site: position = -97 score = 5.61932 sequence = CATCCAAAACGGTTTGGAGC Gene: RB2654_03739: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Oceanicola granulosus HTCC2516 Site: position = -96 score = 6.06337 sequence = CGTCCAAAGCGCTTTGATCC Gene: OG2516_02419: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Loktanella vestfoldensis SKA53 Site: position = -112 score = 6.20408 sequence = CATCCAAAGCGCTTTGGTAC Gene: SKA53_03279: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Silicibacter TM1040 Site: position = -257 score = 5.08268 sequence = CCTCCAAAGCGCTTTAAAAA Site: position = -102 score = 6.3448 sequence = CAATCAAAGCGCTTTGAATC Gene: TM1040_3307: Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
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Alpha-glucoside ABC transporter periplasmic sugar-binding protein |
| aglF |
Gene: RSP_2872: Alpha-glucoside ABC transporter permease protein |
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Gene: Jann_1947: Alpha-glucoside ABC transporter permease protein |
Gene: RB2654_03734: Alpha-glucoside ABC transporter permease protein |
Gene: OG2516_02424: Alpha-glucoside ABC transporter permease protein |
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Gene: SKA53_03284: Alpha-glucoside ABC transporter permease protein |
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Gene: TM1040_3306: Alpha-glucoside ABC transporter permease protein |
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Alpha-glucoside ABC transporter permease protein |
| aglG |
Gene: RSP_2871: Alpha-glucoside ABC transporter permease protein |
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Gene: Jann_1948: Alpha-glucoside ABC transporter permease protein |
Gene: RB2654_03729: Alpha-glucoside ABC transporter permease protein |
Gene: OG2516_02429: Alpha-glucoside ABC transporter permease protein |
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Gene: SKA53_03289: Alpha-glucoside ABC transporter permease protein |
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Gene: TM1040_3305: Alpha-glucoside ABC transporter permease protein |
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Alpha-glucoside ABC transporter permease protein |
| aglA |
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Gene: Jann_1949: Alpha-glucosidase AglA |
Gene: RB2654_03724: Alpha-glucosidase AglA |
Gene: OG2516_02434: Alpha-glucosidase AglA |
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Gene: SKA53_03294: Alpha-glucosidase AglA |
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Gene: TM1040_3304: Alpha-glucosidase AglA |
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Alpha-glucosidase AglA |
| aglK |
Gene: RSP_2870: Alpha-glucoside ABC transporter ATP-binding protein |
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Gene: Jann_1950: Alpha-glucoside ABC transporter ATP-binding protein |
Gene: RB2654_03719: Alpha-glucoside ABC transporter ATP-binding protein |
Gene: OG2516_02439: Alpha-glucoside ABC transporter ATP-binding protein |
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Gene: SKA53_03299: Alpha-glucoside ABC transporter ATP-binding protein |
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Gene: TM1040_3303: Alpha-glucoside ABC transporter ATP-binding protein |
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Alpha-glucoside ABC transporter ATP-binding protein |
| CRON 2. | ||||||||||||||||
| aglR |
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Jannaschia sp. CCS1 Site: position = -31 score = 5.80656 sequence = AATTCCAAGCGCTTTGAAAG Site: position = -204 score = 4.90517 sequence = TTTTCAAAGCGCTTTGGGGT Gene: Jann_1945: Transcriptional regulator of alpha-glucoside utilization, LacI family |
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Rhodobacterales bacterium HTCC2654 Site: position = -170 score = 5.61932 sequence = GCTCCAAACCGTTTTGGATG Gene: RB2654_03744: Transcriptional regulator of alpha-glucoside utilization, LacI family |
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Oceanicola granulosus HTCC2516 Site: position = -194 score = 6.06337 sequence = GGATCAAAGCGCTTTGGACG Site: position = -28 score = 5.12366 sequence = CTCCTAAAGCGCTTTGGAAG Gene: OG2516_02414: Transcriptional regulator of alpha-glucoside utilization, LacI family |
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Loktanella vestfoldensis SKA53 Site: position = -121 score = 6.20408 sequence = GTACCAAAGCGCTTTGGATG Gene: SKA53_03274: Transcriptional regulator of alpha-glucoside utilization, LacI family |
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Silicibacter TM1040 Site: position = -29 score = 5.08268 sequence = TTTTTAAAGCGCTTTGGAGG Site: position = -184 score = 6.3448 sequence = GATTCAAAGCGCTTTGATTG Gene: TM1040_3308: Transcriptional regulator of alpha-glucoside utilization, LacI family |
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Transcriptional regulator of alpha-glucoside utilization, LacI family |
| RSP_2874 |
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Gene: Jann_1944: Beta-glucosidase (EC 3.2.1.21) |
Gene: RB2654_03749: Beta-glucosidase (EC 3.2.1.21) |
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Gene: SKA53_03269: Beta-glucosidase (EC 3.2.1.21) |
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Gene: TM1040_3309: Beta-glucosidase (EC 3.2.1.21) |
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Beta-glucosidase (EC 3.2.1.21) |
| glk |
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Gene: Jann_1943: Glucokinase (EC 2.7.1.2) |
Gene: RB2654_03754: Glucokinase (EC 2.7.1.2) |
Gene: OG2516_02409: Glucokinase (EC 2.7.1.2) |
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Gene: SKA53_03264: Glucokinase (EC 2.7.1.2) |
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Glucokinase (EC 2.7.1.2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |