Regulog FucR - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Fucose utilization
Effector:	Fucose
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - GntR/Others
By effector - Fucose
By pathway - Fucose utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838	1	1
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855	3	1
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343	6	2
Bacteroides ovatus ATCC 8483	6	1
Bacteroides plebeius DSM 17135	5	1
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	6	1
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
fucR	* Bacteroides cellulosilyticus DSM 14838 Site: position = -69 score = 6.32029 sequence = CTTTGCACCAGCACAGTTCAGCACAG Gene: BACCELL_04988: Transcriptional regulator of fucose utilization, GntR family	Bacteroides coprophilus DSM 18228	* Bacteroides dorei DSM 17855 Site: position = -59 score = 6.20682 sequence = CTTTGCATCGGGACAGTTCAGCACAG Gene: BACDOR_02265: Transcriptional regulator of fucose utilization, GntR family	Bacteroides eggerthii DSM 20697	* Bacteroides fragilis NCTC 9343 Site: position = -59 score = 5.98007 sequence = CTTTGTATCATGATAGTTCAGCATAG Gene: BF0210: Transcriptional regulator of fucose utilization, GntR family	* Bacteroides ovatus ATCC 8483 Site: position = -45 score = 6.62787 sequence = CTTTGCATCAGCATAGTTCAGCATAG Gene: BACOVA_03849: Transcriptional regulator of fucose utilization, GntR family	* Bacteroides plebeius DSM 17135 Site: position = -39 score = 5.83307 sequence = CTTTGTGTCAGGATAGTTCAGCACAG Gene: BACPLE_02898: Transcriptional regulator of fucose utilization, GntR family	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -45 score = 6.36123 sequence = CTTTGCAACAGCATAGCTCAGCACAG Gene: BT1272: Transcriptional regulator of fucose utilization, GntR family	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -59 score = 6.20682 sequence = CTTTGCATCGGGACAGTTCAGCACAG Gene: BVU_1374: Transcriptional regulator of fucose utilization, GntR family	Transcriptional regulator of fucose utilization, GntR family
fucI	2 Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04986: L-fucose isomerase (EC 5.3.1.25) Gene: BACCELL_04985: L-fucose isomerase (EC 5.3.1.25)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03383: L-fucose isomerase (EC 5.3.1.25)	Bacteroides dorei DSM 17855 Gene: BACDOR_02264: L-fucose isomerase (EC 5.3.1.25)	Bacteroides eggerthii DSM 20697	* Bacteroides fragilis NCTC 9343 Site: position = -57 score = 5.05886 sequence = CTGTGTGTCAGCACAGGTCAGCATAG Gene: BF0211: L-fucose isomerase (EC 5.3.1.25)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03850: L-fucose isomerase (EC 5.3.1.25)	Bacteroides plebeius DSM 17135 Gene: BACPLE_02897: L-fucose isomerase (EC 5.3.1.25)	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1273: L-fucose isomerase (EC 5.3.1.25)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1373: L-fucose isomerase (EC 5.3.1.25)	L-fucose isomerase (EC 5.3.1.25)
fucA	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04984: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03381: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF0213: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03851: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides plebeius DSM 17135 Gene: BACPLE_02896: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1274: L-fuculose phosphate aldolase (EC 4.1.2.17)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	L-fuculose phosphate aldolase (EC 4.1.2.17)
fucK	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04983: L-fuculokinase (EC 2.7.1.51)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03380: L-fuculokinase (EC 2.7.1.51)	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF0214: L-fuculokinase (EC 2.7.1.51)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03852: L-fuculokinase (EC 2.7.1.51)	Bacteroides plebeius DSM 17135 Gene: BACPLE_02895: L-fuculokinase (EC 2.7.1.51)	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1275: L-fuculokinase (EC 2.7.1.51)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	L-fuculokinase (EC 2.7.1.51)
fucU	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04982: Possible alternative L-fucose mutarotase	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03853: Possible alternative L-fucose mutarotase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1276: Possible alternative L-fucose mutarotase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Possible alternative L-fucose mutarotase
fucP	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_04981: L-fucose permease	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03379: L-fucose permease	Bacteroides dorei DSM 17855 Gene: BACDOR_02263: L-fucose permease	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF0215: L-fucose permease	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03854: L-fucose permease	Bacteroides plebeius DSM 17135 Gene: BACPLE_02894: L-fucose permease	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT1277: L-fucose permease	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1372: L-fucose permease	L-fucose permease
fucO	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03382: Lactaldehyde reductase (EC 1.1.1.77)	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343 Gene: BF0212: Lactaldehyde reductase (EC 1.1.1.77)	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Lactaldehyde reductase (EC 1.1.1.77)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog FucR - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --