Regulog DVU0057 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

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Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - TetR

Statistics of regulated genes
Genome	Genes	Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638	3	1
Desulfovibrio vulgaris Hildenborough	7	1
Desulfovibrio vulgaris str. Miyazaki F	5	1
Lawsonia intracellularis PHE/MN1-00

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU0057	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_34120: Transcriptional regulator, TetR family	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	* Desulfovibrio vulgaris Hildenborough Site: position = -31 score = 6.70386 sequence = GTTTCAAACAAGGGTTGAAAC Gene: DVU0057: Transcriptional regulator, TetR family	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -70 score = 6.96413 sequence = GGTTCAAACAATGATTGAATT Gene: DvMF_2165: Transcriptional regulator, TetR family	Lawsonia intracellularis PHE/MN1-00	Transcriptional regulator, TetR family
DVU0058	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0058: efflux transporter, RND family, MFP subunit	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	efflux transporter, RND family, MFP subunit
DVU0059	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0059: AcrB/AcrD/AcrF family protein	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	AcrB/AcrD/AcrF family protein
acrA	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0307: efflux transporter, RND family, MFP subunit	Desulfovibrio magneticus RS-1 Gene: DMR_28410: efflux transporter, RND family, MFP subunit	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02842: efflux transporter, RND family, MFP subunit	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0060: efflux transporter, RND family, MFP subunit	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2164: efflux transporter, RND family, MFP subunit	Lawsonia intracellularis PHE/MN1-00 Gene: LI0993: efflux transporter, RND family, MFP subunit	efflux transporter, RND family, MFP subunit
acrB	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0308: RND efflux system, inner membrane transporter CmeB	Desulfovibrio magneticus RS-1 Gene: DMR_28420: RND efflux system, inner membrane transporter CmeB	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02843: RND efflux system, inner membrane transporter CmeB	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0061: RND efflux system, inner membrane transporter CmeB	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2163: RND efflux system, inner membrane transporter CmeB	Lawsonia intracellularis PHE/MN1-00 Gene: LI0994: RND efflux system, inner membrane transporter CmeB	RND efflux system, inner membrane transporter CmeB
oprM	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0309: RND efflux system, outer membrane lipoprotein, NodT family	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098 Gene: DESPIG_02844: RND efflux system, outer membrane lipoprotein, NodT family	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0062: RND efflux system, outer membrane lipoprotein, NodT family	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2162: RND efflux system, outer membrane lipoprotein, NodT family	Lawsonia intracellularis PHE/MN1-00 Gene: LI0995: RND efflux system, outer membrane lipoprotein, NodT family	RND efflux system, outer membrane lipoprotein, NodT family
DVU0063	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough Gene: DVU0063: Transcriptional regulator, MarR family	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_1558: Transcriptional regulator, MarR family	Lawsonia intracellularis PHE/MN1-00	Transcriptional regulator, MarR family
DMR_28430	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1 Gene: DMR_28430: Transcriptional regulator, MarR family	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F Gene: DvMF_2161: Transcriptional regulator, MarR family	Lawsonia intracellularis PHE/MN1-00	Transcriptional regulator, MarR family

CRON 2.
Desal_0950	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -37 score = 6.70386 sequence = GCTTCAAACAGTGTTTTAATT Gene: Desal_0950: transcriptional regulator, TetR family	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	transcriptional regulator, TetR family
Dbac_1783	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1783: efflux transporter, RND family, MFP subunit	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0949: efflux transporter, RND family, MFP subunit	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	efflux transporter, RND family, MFP subunit
Dbac_1782	Desulfohalobium retbaense DSM 5692	Desulfomicrobium baculatum DSM 4028 Gene: Dbac_1782: acriflavin resistance protein	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio magneticus RS-1	Desulfovibrio piger ATCC 29098	Desulfovibrio salexigens DSM 2638 Gene: Desal_0948: acriflavin resistance protein	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Lawsonia intracellularis PHE/MN1-00	acriflavin resistance protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU0057 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --