Statistics of regulated genes

Genome	Genes	Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42	3	3
Bacillus cereus ATCC 14579	2	2
Bacillus clausii KSM-K16	2	2
Bacillus halodurans C-125	2	2
Bacillus licheniformis DSM 13	2	2
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168	5	5
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831	3	2
Paenibacillus sp. JDR-2	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes												Function
CRON 1.
BC3390	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579 Gene: BC3390: Nitroreductase family protein	* Bacillus clausii KSM-K16 Site: position = -177 score = 4.89546 sequence = CAGTTTCTTTTTATATACTA Site: position = -103 score = 5.62354 sequence = TAGTTTCTTTTATTATACTA Gene: ABC0785: Nitroreductase family protein	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Nitroreductase family protein
CRON 2.
BH0738	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC0750: Zinc-containing alcohol dehydrogenase / Quinone oxidoreductase ( NADPH:quinone reductase)	* Bacillus halodurans C-125 Site: position = -101 score = 5.16591 sequence = TAGTAACCTACATGTAACTA Gene: BH0738: Zinc-containing alcohol dehydrogenase / Quinone oxidoreductase ( NADPH:quinone reductase)	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032 Gene: BPUM_0783: Zinc-containing alcohol dehydrogenase / Quinone oxidoreductase ( NADPH:quinone reductase)	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Zinc-containing alcohol dehydrogenase / Quinone oxidoreductase ( NADPH:quinone reductase)
CRON 3.
ppaC	Anoxybacillus flavithermus WK1	* Bacillus amyloliquefaciens FZB42 Site: position = -193 score = 5.96763 sequence = TAGTACCTTTTTTGATACTA Gene: RBAM_037630: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Bacillus cereus ATCC 14579 Gene: BC2826: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Bacillus clausii KSM-K16 Gene: ABC2903: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032 Gene: BPUM_3708: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -190 score = 5.96763 sequence = TAGTACCTTTTTTGATACTA Gene: BSU40550: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB1018: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2048: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
CRON 4.
yybR	Anoxybacillus flavithermus WK1	* Bacillus amyloliquefaciens FZB42 Site: position = -33 score = 5.96763 sequence = TAGTATCAAAAAAGGTACTA Gene: RBAM_037620: Transcriptional regulator, HxlR family	* Bacillus cereus ATCC 14579 Site: position = -42 score = 6.26811 sequence = TAGTATCAAAAAAGATACTA Gene: BC3320: Transcriptional regulator, HxlR family	* Bacillus clausii KSM-K16 Site: position = -103 score = 5.62354 sequence = TAGTATAATAAAAGAAACTA Gene: ABC0784: Transcriptional regulator, HxlR family	* Bacillus halodurans C-125 Site: position = -49 score = 5.16591 sequence = TAGTTACATGTAGGTTACTA Gene: BH0737: Transcriptional regulator, HxlR family	* Bacillus licheniformis DSM 13 Site: position = -33 score = 6.31707 sequence = TAGTATCATTTTTTATACTA Gene: BLi00812: Transcriptional regulator, HxlR family	Bacillus pumilus SAFR-032 Gene: BPUM_3162: Transcriptional regulator, HxlR family	*2 Bacillus subtilis subsp. subtilis str. 168 Site: position = -34 score = 5.96763 sequence = TAGTATCAAAAAAGGTACTA Gene: BSU40540: Transcriptional regulator, HxlR family Site: position = -35 score = 6.18055 sequence = TAGTATCAAAAAGTATACTA Gene: BSU05290: Transcriptional regulator, HxlR family	Geobacillus kaustophilus HTA426	* Oceanobacillus iheyensis HTE831 Site: position = -45 score = 5.61318 sequence = TAGTTTCCTTAAAGATACTA Gene: OB0354: Transcriptional regulator, HxlR family	* Paenibacillus sp. JDR-2 Site: position = -72 score = 5.97303 sequence = TAGTATTAAAAAGGATACTA Gene: Pjdr2_4452: Transcriptional regulator, HxlR family	Transcriptional regulator, HxlR family
CRON 5.
RBAM_017530	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017530: Putative oxidoreductase	Bacillus cereus ATCC 14579 Gene: BC1937: Putative oxidoreductase	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	* Oceanobacillus iheyensis HTE831 Site: position = -123 score = 5.61318 sequence = TAGTATCTTTAAGGAAACTA Gene: OB0355: Putative oxidoreductase	Paenibacillus sp. JDR-2 Gene: Pjdr2_2014: Putative oxidoreductase	Putative oxidoreductase
OB0356	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB0356: FMN reductase (EC 1.5.1.29)	Paenibacillus sp. JDR-2	FMN reductase (EC 1.5.1.29)
CRON 6.
yfkO	Anoxybacillus flavithermus WK1	* Bacillus amyloliquefaciens FZB42 Site: position = -100 score = 5.45533 sequence = CAGTATCAAAATGAATACTA Gene: RBAM_008000: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	* Bacillus cereus ATCC 14579 Site: position = -107 score = 6.26811 sequence = TAGTATCTTTTTTGATACTA Gene: BC3321: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	Bacillus clausii KSM-K16	Bacillus halodurans C-125 Gene: BH0405: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	* Bacillus licheniformis DSM 13 Site: position = -117 score = 6.31707 sequence = TAGTATAAAAAATGATACTA Gene: BLi00813: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	Bacillus pumilus SAFR-032 Gene: BPUM_3161: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -103 score = 5.96078 sequence = TGGTATCAAAATTGATACTA Gene: BSU07830: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB3126: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	*2 Paenibacillus sp. JDR-2 Gene: Pjdr2_4584: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) Site: position = -145 score = 5.97303 sequence = TAGTATCCTTTTTAATACTA Gene: Pjdr2_4453: Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)	Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34)
CRON 7.
ydeQ	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -95 score = 6.18055 sequence = TAGTATACTTTTTGATACTA Gene: BSU05300: Putative NAD(P)H oxidoreductase	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative NAD(P)H oxidoreductase

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