Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NsrR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 30 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 4 2
Bacillus amyloliquefaciens FZB42 4 2
Bacillus pumilus SAFR-032 4 3
Bacillus licheniformis DSM 13 5 3
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426 2 2
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 1 1
Bacillus clausii KSM-K16 2 2
Oceanobacillus iheyensis HTE831 2 2
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nasD
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -74
score = 6.43623
sequence = ATAACATGTATCTTAAATATTCCTTTT

Gene: BSU03300: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -73
score = 5.77288
sequence = ATAACATGCACCTTAAATATTTGTTTT

Gene: RBAM_003510: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
*
Bacillus pumilus SAFR-032

Site:
position = -72
score = 6.62224
sequence = AAAAGGTGTATTTTATATCTATGTTTA

Gene: BPUM_1811: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
*
Bacillus licheniformis DSM 13

Site:
position = -67
score = 6.52635
sequence = TAAAGATGTAAATAGAATACTTGTTTA

Gene: BLi00484: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1868: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
 
Bacillus cereus ATCC 14579

Gene: BC2136: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
 
Bacillus halodurans C-125

Gene: BH0613: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
 
Bacillus clausii KSM-K16

Gene: ABC1621: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5917: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
nasE
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU03290: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_003500: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus pumilus SAFR-032

Gene: BPUM_1810: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus licheniformis DSM 13

Gene: BLi00485: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1867: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus cereus ATCC 14579

Gene: BC2135: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus halodurans C-125

Gene: BH0614: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Bacillus clausii KSM-K16

Gene: ABC1622: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5916: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nasF
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU03280: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_003490: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi00486: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC2134: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC1620: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
CRON 2.
nsrR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU09380: Transcription regulator of nitrosative stress response, Rrf2 family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_009640: Transcription regulator of nitrosative stress response, Rrf2 family
*
Bacillus pumilus SAFR-032

Site:
position = -167
score = 7.46884
sequence = AAAAGGTGTATTTTAAATACATCTTTA

Site:
position = -119
score = 6.44107
sequence = AAAAGCAATATTTATAATACATGTTTT

Gene: BPUM_0893: Transcription regulator of nitrosative stress response, Rrf2 family
*
Bacillus licheniformis DSM 13

Site:
position = -232
score = 6.85982
sequence = TAAAAATGTATTTGAAATACATCTTTA

Site:
position = -161
score = 7.48847
sequence = TAAAGATGTATTTTAGATACATCTTTA

Site:
position = -114
score = 5.30339
sequence = TAAAGCAATATTATCAATGAATGTTTT

Gene: BLi01005: Transcription regulator of nitrosative stress response, Rrf2 family
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -155
score = 7.2882
sequence = AAAACATGTATTTTTAATACATCTTTT

Site:
position = -107
score = 6.02784
sequence = AAAAACAATATTTCAAATACATCTTTA

Gene: GK1738: Transcription regulator of nitrosative stress response, Rrf2 family
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1057: Transcription regulator of nitrosative stress response, Rrf2 family
*2
Bacillus clausii KSM-K16

Site:
position = -173
score = 6.89029
sequence = AAAATAAGTATTTTATATATATATTTA

Site:
position = -126
score = 5.84126
sequence = TAAATCAATATTTAAAATGCATATTAT

Gene: ABC0349: Transcription regulator of nitrosative stress response, Rrf2 family

Gene: ABC3754: Transcription regulator of nitrosative stress response, Rrf2 family
*
Oceanobacillus iheyensis HTE831

Site:
position = -116
score = 7.31674
sequence = AAAAGATGTATTTTCTATACATCTTTT

Gene: OB0292: Transcription regulator of nitrosative stress response, Rrf2 family
 
Paenibacillus sp. JDR-2
Transcription regulator of nitrosative stress response, Rrf2 family
 
CRON 3.
hmp
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -93
score = 6.47701
sequence = TAAAGATTCATTTTAGATATATCTTTT

Site:
position = -46
score = 7.54754
sequence = TAAAGATATATTTTAAATACATCTTTT

Gene: BSU13040: Flavohemoprotein
*2
Bacillus amyloliquefaciens FZB42

Site:
position = -92
score = 6.69191
sequence = TAAAGATTCATTTTAAATATATCTTTT

Site:
position = -45
score = 7.26549
sequence = TAAAGATATATTGAAAATACATCTTTA

Gene: RBAM_028210: Flavohemoprotein

Gene: RBAM_026710: Flavohemoprotein
*
Bacillus pumilus SAFR-032

Site:
position = -91
score = 6.44107
sequence = AAAACATGTATTATAAATATTGCTTTT

Site:
position = -43
score = 7.46884
sequence = TAAAGATGTATTTAAAATACACCTTTT

Gene: BPUM_0894: Flavohemoprotein
*
Bacillus licheniformis DSM 13

Site:
position = -170
score = 5.30339
sequence = AAAACATTCATTGATAATATTGCTTTA

Site:
position = -123
score = 7.48847
sequence = TAAAGATGTATCTAAAATACATCTTTA

Site:
position = -52
score = 6.85982
sequence = TAAAGATGTATTTCAAATACATTTTTA

Gene: BLi01006: Flavohemoprotein
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -91
score = 6.02784
sequence = TAAAGATGTATTTGAAATATTGTTTTT

Site:
position = -43
score = 7.2882
sequence = AAAAGATGTATTAAAAATACATGTTTT

Gene: GK1737: Flavohemoprotein
 
Bacillus cereus ATCC 14579

Gene: BC1448: Flavohemoprotein
*
Bacillus halodurans C-125

Site:
position = -95
score = 6.21353
sequence = TAAATATGTATTTTAAATATTGATTAA

Site:
position = -48
score = 6.73883
sequence = TAAATATGTATACAAAATACTTATTTA

Gene: BH1058: Flavohemoprotein
*
Bacillus clausii KSM-K16

Site:
position = -91
score = 5.84126
sequence = ATAATATGCATTTTAAATATTGATTTA

Site:
position = -44
score = 6.89029
sequence = TAAATATATATATAAAATACTTATTTT

Gene: ABC0350: Flavohemoprotein
*
Oceanobacillus iheyensis HTE831

Site:
position = -43
score = 7.31674
sequence = AAAAGATGTATAGAAAATACATCTTTT

Gene: OB0291: Flavohemoprotein
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5495: Flavohemoprotein
Flavohemoprotein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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