Regulog TrpR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Tryptophan biosynthesis |
| Effector: | Tryptophan |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - TrpR
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Tryptophan biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 11 | 5 |
| Salmonella typhimurium LT2 | 11 | 5 |
| Citrobacter koseri ATCC BAA-895 | 11 | 5 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 8 | 4 |
| Enterobacter sp. 638 | 11 | 5 |
| Erwinia amylovora ATCC 49946 | 8 | 3 |
| Yersinia pestis KIM | 3 | 3 |
| Serratia proteamaculans 568 | 8 | 3 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 7 | 2 |
| Edwardsiella tarda EIB202 | 9 | 4 |
| Proteus mirabilis HI4320 | 7 | 2 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 7 | 2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| aroH |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -164 score = 5.25041 sequence = TGTACTAGAGAACTAGTGCA Gene: b1704: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Salmonella typhimurium LT2 Site: position = -163 score = 4.89393 sequence = TGTACTAGCAAACTAGTTTA Gene: STM1347: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -173 score = 4.50121 sequence = TGTACTAACAAACTAGTGCA Site: position = -165 score = 4.51301 sequence = CAAACTAGTGCAAGAGTTCA Gene: CKO_01728: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -162 score = 4.89388 sequence = TGTACTAATACACTAGTACA Gene: KPN_02162: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Enterobacter sp. 638 Site: position = -159 score = 5.01019 sequence = TGTACTAATATGCTAGTACA Gene: Ent638_1743: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
|
Gene: y1928: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
Gene: Spro_2172: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
Gene: ECA1851: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
*
Edwardsiella tarda EIB202 Site: position = -135 score = 5.00508 sequence = TGTACTAGTAAGAAAGTACA Gene: ETAE_1792: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
Gene: PMI1423: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
Gene: plu2630: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
| CRON 2. | |||||||||||||
| aroL |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -79 score = 5.64778 sequence = TGTACTAGTTTGATGGTATG Gene: b0388: Shikimate kinase III (EC 2.7.1.71) |
*
Salmonella typhimurium LT2 Site: position = -79 score = 5.12954 sequence = TGTACTAGTTAGATGATATG Gene: STM0388: Shikimate kinase III (EC 2.7.1.71) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -136 score = 5.3631 sequence = TGTACTAGTTTGGTGGTATG Gene: CKO_02783: Shikimate kinase III (EC 2.7.1.71) |
Gene: KPN_00332: Shikimate kinase III (EC 2.7.1.71) |
*
Enterobacter sp. 638 Site: position = -80 score = 5.59154 sequence = CGTACTAGTTTAATGGTATT Gene: Ent638_0859: Shikimate kinase III (EC 2.7.1.71) |
Gene: EAM_0932: Shikimate kinase III (EC 2.7.1.71) |
Gene: y0972: Shikimate kinase III (EC 2.7.1.71) |
Gene: Spro_1018: Shikimate kinase III (EC 2.7.1.71) |
Gene: ECA1103: Shikimate kinase III (EC 2.7.1.71) |
|
Gene: PMI0371: Shikimate kinase III (EC 2.7.1.71) |
Gene: plu1245: Shikimate kinase III (EC 2.7.1.71) |
Shikimate kinase III (EC 2.7.1.71) |
| yaiA |
Gene: b0389: putative cytoplasmic protein |
Gene: STM0389: putative cytoplasmic protein |
Gene: CKO_02782: putative cytoplasmic protein |
Gene: KPN_00333: putative cytoplasmic protein |
Gene: Ent638_0860: putative cytoplasmic protein |
Gene: EAM_0933: putative cytoplasmic protein |
|
Gene: Spro_1021: putative cytoplasmic protein |
|
|
|
|
putative cytoplasmic protein |
| aroM |
Gene: b0390: AroM family protein |
Gene: STM0390: AroM family protein |
Gene: CKO_02781: AroM family protein |
Gene: KPN_00334: AroM family protein |
Gene: Ent638_0861: AroM family protein |
Gene: EAM_0937: AroM family protein |
|
Gene: Spro_1025: AroM family protein |
|
|
|
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AroM family protein |
| CRON 3. | |||||||||||||
| trpE |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -183 score = 6.34681 sequence = CGAACTAGTTAACTAGTACG Gene: b1264: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Salmonella typhimurium LT2 Site: position = -186 score = 6.34681 sequence = CGAACTAGTTAACTAGTACG Gene: STM1723: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -174 score = 6.34681 sequence = CGAACTAGTTAACTAGTACG Gene: CKO_01340: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -198 score = 6.34681 sequence = CGAACTAGTTAACTAGTACG Gene: KPN_01257: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Enterobacter sp. 638 Site: position = -186 score = 6.34681 sequence = CGAACTAGTTAACTAGTACG Gene: Ent638_2204: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Erwinia amylovora ATCC 49946 Site: position = -192 score = 6.16903 sequence = CGAACCAGTTAACTAGTACA Gene: EAM_1877: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Yersinia pestis KIM Site: position = -283 score = 6.2123 sequence = TGAACCAGTTAACTAGTACA Gene: y2051: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Serratia proteamaculans 568 Site: position = -219 score = 6.16903 sequence = CGAACCAGTTAACTAGTACA Gene: Spro_2667: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -231 score = 6.16903 sequence = CGAACCAGTTAACTAGTACA Gene: ECA2296: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Edwardsiella tarda EIB202 Site: position = -222 score = 5.61383 sequence = GAAACTAGTTTACTAGTACG Gene: ETAE_1535: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Proteus mirabilis HI4320 Site: position = -243 score = 5.426 sequence = TAATCCAGTTTACTAGTACA Gene: PMI1343: Anthranilate synthase, aminase component (EC 4.1.3.27) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -196 score = 5.82188 sequence = CGTTCCAGTTTACTAGTACA Gene: plu2462: Anthranilate synthase, aminase component (EC 4.1.3.27) |
Anthranilate synthase, aminase component (EC 4.1.3.27) |
| trpD |
Gene: b1263: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: STM1724: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: CKO_01339: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: KPN_01256: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: Ent638_2205: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
2
Erwinia amylovora ATCC 49946 Gene: EAM_1878: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: EAM_1879: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
|
2
Serratia proteamaculans 568 Gene: Spro_2668: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: Spro_2669: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
2
Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2298: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: ECA2297: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
2
Edwardsiella tarda EIB202 Gene: ETAE_1534: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: ETAE_1533: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
2
Proteus mirabilis HI4320 Gene: PMI1344: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: PMI1345: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
2
Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu2463: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Gene: plu2464: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
| trpC |
Gene: b1262: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: STM1725: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: CKO_01338: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: KPN_01255: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: Ent638_2206: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: EAM_1880: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: y2049: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: Spro_2670: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: ECA2299: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: ETAE_1532: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: PMI1346: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: plu2465: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
| trpB |
Gene: b1261: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: STM1726: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: CKO_01337: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: KPN_01254: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: Ent638_2207: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: EAM_1881: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: y2048: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: Spro_2671: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: ECA2300: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: ETAE_1531: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: PMI1347: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: plu2466: Tryptophan synthase beta chain (EC 4.2.1.20) |
Tryptophan synthase beta chain (EC 4.2.1.20) |
| trpA |
Gene: b1260: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: STM1727: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: CKO_01336: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: KPN_01253: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: Ent638_2208: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: EAM_1882: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: y2047: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: Spro_2672: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: ECA2301: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: ETAE_1530: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: PMI1348: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: plu2467: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Tryptophan synthase alpha chain (EC 4.2.1.20) |
| CRON 4. | |||||||||||||
| mtr |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -72 score = 5.87929 sequence = TGTACTCGTGTACTGGTACA Gene: b3161: Tryptophan-specific transport protein |
*
Salmonella typhimurium LT2 Site: position = -72 score = 5.87929 sequence = TGTACTCGTGTACTGGTACA Gene: STM3279: Tryptophan-specific transport protein |
*2
Citrobacter koseri ATCC BAA-895 Site: position = -72 score = 5.43852 sequence = TGTACTCGCGTACTGGTACA Gene: CKO_04558: Tryptophan-specific transport protein Gene: CKO_02850: Tryptophan-specific transport protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -71 score = 5.87929 sequence = TGTACTCGTGTACTGGTACA Gene: KPN_03569: Tryptophan-specific transport protein |
*
Enterobacter sp. 638 Site: position = -71 score = 5.44415 sequence = TGTACTCCTGTACTGGTACA Gene: Ent638_3598: Tryptophan-specific transport protein |
*
Erwinia amylovora ATCC 49946 Site: position = -112 score = 4.78562 sequence = TGTACTAGTTCGATGGTGTG Gene: EAM_1150: Tryptophan-specific transport protein |
*
Yersinia pestis KIM Site: position = -139 score = 4.99534 sequence = TGTACCATTCAGCTAGTACA Gene: y2900: Tryptophan-specific transport protein |
*
Serratia proteamaculans 568 Site: position = -58 score = 5.3094 sequence = TGTACCATTGAGCTAGTACA Gene: Spro_3236: Tryptophan-specific transport protein |
Gene: ECA0872: Tryptophan-specific transport protein |
*
Edwardsiella tarda EIB202 Site: position = -48 score = 4.78289 sequence = CGTACCATTGCGCTAGTACA Gene: ETAE_2287: Tryptophan-specific transport protein |
Gene: PMI0836: Tryptophan-specific transport protein |
Gene: plu2860: Tryptophan-specific transport protein |
Tryptophan-specific transport protein |
| CRON 5. | |||||||||||||
| trpR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -66 score = 5.31561 sequence = CGTACTCTTTAGCGAGTACA Gene: b4393: Trp operon repressor |
*
Salmonella typhimurium LT2 Site: position = -34 score = 5.58214 sequence = TGTACTCGTGTAACAGTACA Gene: STM4583: Trp operon repressor |
*
Citrobacter koseri ATCC BAA-895 Site: position = -97 score = 5.98197 sequence = CGTACTCGTTAAAGAGTACA Gene: CKO_03393: Trp operon repressor |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -65 score = 5.74035 sequence = TGTACTCGTTGAAGAGTACA Gene: KPN_04848: Trp operon repressor |
*
Enterobacter sp. 638 Site: position = 3 score = 5.48002 sequence = TGTACTcGTcAAagAGTACA Gene: Ent638_0554: Trp operon repressor |
*
Erwinia amylovora ATCC 49946 Site: position = -33 score = 6.21402 sequence = TGTACTAGTTAAATAGTATG Gene: EAM_0634: Trp operon repressor |
*
Yersinia pestis KIM Site: position = -24 score = 6.061 sequence = TGTACTAGTTAAATAGTACT Gene: y3726: Trp operon repressor |
*
Serratia proteamaculans 568 Site: position = -30 score = 6.21402 sequence = TGTACTAGTTAAATAGTATG Gene: Spro_0676: Trp operon repressor |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -30 score = 6.17075 sequence = CGTACTAGTTAAATAGTATG Gene: ECA3899: Trp operon repressor |
*
Edwardsiella tarda EIB202 Site: position = -44 score = 5.56645 sequence = TGTACTCGTTGAATAGTTCA Gene: ETAE_0543: Trp operon repressor |
*
Proteus mirabilis HI4320 Site: position = -39 score = 5.17674 sequence = TGTACTAGTTTATGAGTGTG Gene: PMI3714: Trp operon repressor |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -34 score = 6.21402 sequence = TGTACTAGTTAAATAGTATG Gene: plu0557: Trp operon repressor |
Trp operon repressor |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |