Regulon of TrpR in Salmonella typhimurium LT2
| Regulator type: | Transcription factor |
| TF locus tag: | STM4583 |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Tryptophan biosynthesis |
| Effector: | Tryptophan |
| Regulog: | TrpR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - TrpR
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Tryptophan biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -186
Score: 6.3 Sequence: CGAACTAGTTAACTAGTACG
Locus tag: STM1723
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: STM1724
Name: trpD Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: STM1725
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: STM1726
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: STM1727
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE
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Anthranilate synthase, aminase component (EC 4.1.3.27)
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trpD
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Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
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trpC
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Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
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trpB
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Tryptophan synthase beta chain (EC 4.2.1.20)
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trpA
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Tryptophan synthase alpha chain (EC 4.2.1.20)
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Position: -34
Score: 5.6 Sequence: TGTACTCGTGTAACAGTACA
Locus tag: STM4583
Name: trpR Funciton: Trp operon repressor |
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trpR
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Trp operon repressor
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Position: -72
Score: 5.9 Sequence: TGTACTCGTGTACTGGTACA
Locus tag: STM3279
Name: mtr Funciton: Tryptophan-specific transport protein |
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mtr
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Tryptophan-specific transport protein
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Position: -79
Score: 5.1 Sequence: TGTACTAGTTAGATGATATG
Locus tag: STM0388
Name: aroL Funciton: Shikimate kinase III (EC 2.7.1.71)
Locus tag: STM0389
Name: yaiA Funciton: putative cytoplasmic protein
Locus tag: STM0390
Name: aroM Funciton: AroM family protein |
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aroL
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Shikimate kinase III (EC 2.7.1.71)
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yaiA
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putative cytoplasmic protein
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aroM
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AroM family protein
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Position: -163
Score: 4.9 Sequence: TGTACTAGCAAACTAGTTTA
Locus tag: STM1347
Name: aroH Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) |
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aroH
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2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |