Propagation of CcmR regulog to Lyngbya sp. PCC 8106

Reference regulog properties
Source regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Lyngbya sp. PCC 8106
Orthologous TF(s)	L8106_08421
Regulated genes	5

Built upon 72 sites [see more]

Predicted regulatory interactions in *Lyngbya sp. PCC 8106*
	Locus tag	Position	Score	Sequence
Position: -144 Score: 4.7 Sequence: ATAGATAAGGGTCTAT Position: -112 Score: 5.3 Sequence: ATTGACTAAAATCTAT Locus tag: L8106_08421
	L8106_08421	-144	4.7	ATAGATAAGGGTCTAT
		-112	5.3	ATTGACTAAAATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccmR
Ortholog function: Carbon assimilation transcriptional regulator, LysR family
Cyanothece sp. ATCC 51142	cce_3731	-133	4.3	ATAGATTTATTTCAAC
		-101	4.8	ATGGAAATAAGTCTAT
Cyanothece sp. PCC 8801	PCC8801_3406	-144	4.4	ATAGAATTTAATCAAA
		-112	4.8	ATTGTATTTAATCTAT
Microcystis aeruginosa NIES-843	MAE_62070	-238	4.3	ATAGACAAAACTTTAT
		-207	4.9	ATTGTTATAAATCTAT
		-122	4.9	ATTGATTTAAACCTAT
Microcystis aeruginosa NIES-843	MAE_15110	-71	4.9	ATTGACTAGAATCTAT
Synechocystis sp. PCC 6803	sll1594	-240	4.7	ATTGGCTTTATTCTAT
		-179	4.8	ATAGCCATAGGTCTAT

Position: -77 Score: 5.2 Sequence: ATAGATTTTAGTCAAT Locus tag: L8106_08426
	L8106_08426	-77	5.2	ATAGATTTTAGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bicA
Ortholog function: Bicarbonate transporter
Cyanothece sp. ATCC 51142	cce_1689	-232	4.5	ATAGTAATTAGCCTAT
		-200	5	ATAGAATCTAGTCTAT

Position: -21 Score: 4.2 Sequence: ACAGTCTTTTATCAAT Locus tag: L8106_03694
	L8106_03694	-21	4.2	ACAGTCTTTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndhD3
Ortholog function: NADH dehydrogenase subunit D
Cyanothece sp. ATCC 51142	cce_0604	-74	5.5	ATAGACTTAATTCTAT
Cyanothece sp. PCC 8801	PCC8801_4249	-71	5.6	ATAGACTAAAGTCTAT
		-8	5	ATTGTTATATGTCTAT
Gloeobacter violaceus PCC 7421	gvip133	-139	5	ATCTACTTTTATCTAT
Microcystis aeruginosa NIES-843	MAE_15140	-71	4.9	ATTGACTAGAATCTAT
Nostoc sp. PCC 7120	alr4157	-245	5.9	ATAGATTTTTGTCTAT
Synechococcus sp. JA-3-3Ab	CYA_0639	-107	5	CTTGATTTTTGTCTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A0173	-63	5	ATTGACTCTAGTCTAT
Synechocystis sp. PCC 6803	sll1733	-204	3.9	ATTGTCGCTTGACTAT

Position: -128 Score: 4 Sequence: TTAGATTTTAATCTGA Locus tag: L8106_03759
	L8106_03759	-128	4	TTAGATTTTAATCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cupS
Ortholog function: CO2 uptake transporter, small subunit
Gloeobacter violaceus PCC 7421	glr1006	-139	5	ATCTACTTTTATCTAT
Nostoc sp. PCC 7120	alr1320	34	4.4	ATAGTTTTAAAACTCT
Synechococcus sp. JA-3-3Ab	CYA_0636	-107	5	CTTGATTTTTGTCTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A0175	-63	5	ATTGACTCTAGTCTAT
Synechocystis sp. PCC 6803	sll1735	-204	3.9	ATTGTCGCTTGACTAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CcmR regulog to Lyngbya sp. PCC 8106

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --