Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Bacillus coagulans 36D1

Type Regulator Effector Pathway Genes Sites
TF AcoR Acetoin Acetoin utilization 1 1
TF AraR Arabinose Arabinose utilization 4 6
TF BglZ Beta-glucoside Beta-glucosides utilization 1 1
TF BirA Biotin Biotin biosynthesis 1 1
TF CcpA HPr, phosphocarrier protein Carbon catabolism 21 27
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CitT Citrate Citrate utilization 1 2
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 24 36
TF CtsR Heat shock Heat shock response 2 4
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 6 6
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 3 4
TF FapR Malonyl-CoA Fatty acid biosynthesis 1 1
TF Fnr Oxygen Anaerobic metabolism 2 3
TF Fur Iron ion, (Fe2+) Iron homeostasis 2 7
TF HrcA Heat shock Heat shock response 1 1
TF LexA DNA damage SOS response 3 3
TF LutR L-lactate Lactate utilization 2 2
TF MdxR Maltose Maltodextrin utilization; Maltose utilization 1 1
TF NiaR Niacin NAD biosynthesis 2 2
TF NsrR Nitric oxide Nitrosative stress response 2 4
TF PadR p-Coumaric acid; Ferulic acid Phenolic acid stress response 1 1
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 6 9
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 2 2
TF QdoR Quercetin; Fisetin; Tamarixetin; Galangin Multidrug resistance 1 1
TF Rex NADH Energy metabolism 4 6
TF RocR Ornithine; L-citrulline Arginine degradation; Ornithine degradation 2 2
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 15 21
TF XylR Xylose Xylose utilization 2 2
TF YbzH Metabolite transport 1 1
TF YhcF Multidrug resistance; Multidrug efflux 1 1
TF YodB/CatR Diamide; Quinone Oxidative stress response 1 1
TF YrkD Multidrug resistance 1 1
TF YvfU YvfT, sensor histidine kinase Metabolite transport 1 1
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